RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 SIDT1Q9NXL6 827 aaKnown RBP9.02□□□□□ -0.97
BRCA1-219ENST00000491747 APC2O95996 2303 aa9.02□□□□□ -0.97
BRCA1-219ENST00000491747 DHRS12A0PJE2 317 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 DYTNA2CJ06 578 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 PFDN6O15212 129 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 LTA4HP09960 611 aaKnown RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 HMOX2P30519 316 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 STT3AP46977 705 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ATP6V0D1P61421 351 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 MERTKQ12866 999 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 BNIP2Q12982 314 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ACAP2Q15057 778 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 RBM20Q5T481 1227 aaKnown RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ANKS6Q68DC2 871 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 PRSS42Q7Z5A4 293 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 AMIGO1Q86WK6 493 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 OOSP2Q86WS3 158 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 FAM129CQ86XR2 697 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 CBR4Q8N4T8 237 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 KLHL6Q8WZ60 621 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 C12orf43Q96C57 262 aaKnown RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 RNF31Q96EP0 1072 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 TSPAN17Q96FV3 270 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ZDHHC12Q96GR4 267 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 SLC45A3Q96JT2 553 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 AARSD1Q9BTE6 412 aaKnown RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 C9orf16Q9BUW7 83 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 TWSG1Q9GZX9 223 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 TRIT1Q9H3H1 467 aaKnown RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 THSD1Q9NS62 852 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 IGSF5Q9NSI5 407 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 SLC39A1Q9NY26 324 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 SPHK1Q9NYA1 384 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 SEMA5BQ9P283 1151 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 AURKCQ9UQB9 309 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 TRAF6Q9Y4K3 522 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 B3GALT1Q9Y5Z6 326 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 CFAP47Q6ZTR5 3102 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 RNF103-CHMP3A0A140T963 221 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 H3BMM5 538 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 PLOD2O00469 737 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 KPNA5O15131 536 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 FASP25445 335 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 PEBP1P30086 187 aaKnown RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 BDKRB1P46663 353 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ENTPD1P49961 510 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 MC2RQ01718 297 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 LARP4Q71RC2 724 aaKnown RBP eCLIP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ZFAND4Q86XD8 727 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 ZBTB2Q8N680 514 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 OR9I1Q8NGQ6 314 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 FLVCR1-AS1Q8TAF5 88 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 THAP11Q96EK4 314 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 CRELD1Q96HD1 420 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 IL17FQ96PD4 163 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 TAAR9Q96RI9 348 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 GPR21Q99679 349 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 TBC1D23Q9NUY8 699 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 AKAP7Q9P0M2 348 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-219ENST00000491747 VPS9D1Q9Y2B5 631 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 SH3GLB1Q9Y371 365 aa9.01□□□□□ -0.97
BRCA1-219ENST00000491747 A0A087WV48 116 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 TRIM64A6NGJ6 449 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SAC3D1A6NKF1 404 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 B4E171 279 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 E5RI56 91 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 TOX3O15405 576 aaPredicted RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 MAGEB3O15480 346 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 MATN4O95460 622 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 C1orf105O95561 183 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 FCGR1AP12314 374 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 ATP6V1B2P21281 511 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 PRDX3P30048 256 aaKnown RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 TSPAN7P41732 249 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 MLLT3P42568 568 aaPredicted RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 MAGEA8P43361 318 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 CDKN2DP55273 166 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 PCBP4P57723 403 aaKnown RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 KCNAB1Q14722 419 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 TGIF1Q15583 401 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 UNC5DQ6UXZ4 953 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 CYHR1Q6ZMK1 362 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 Q6ZNX1 250 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 C2orf73Q8N5S3 287 aaPredicted RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 LINC01555Q8NAE3 123 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 CD200R1Q8TD46 325 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SNRNP27Q8WVK2 155 aaKnown RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 KCNJ9Q92806 393 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 PHF21BQ96EK2 531 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 C19orf60Q96EN9 201 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 CENPNQ96H22 339 aaPredicted RBP9□□□□□ -0.97
BRCA1-219ENST00000491747 VPS50Q96JG6 964 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 SLC39A3Q9BRY0 314 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 CXorf21Q9HAI6 301 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 AGPAT4Q9NRZ5 378 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 ABCD2Q9UBJ2 740 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 POLG2Q9UHN1 485 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 POMT2Q9UKY4 750 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 NDUFAF1Q9Y375 327 aa9□□□□□ -0.97
BRCA1-219ENST00000491747 DHRS7Q9Y394 339 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms