RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 TRIM40Q6P9F5 258 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 TMEM207Q6UWW9 146 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 ZDHHC24Q6UX98 284 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 TMEM178AQ8NBL3 297 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 PSMF1Q92530 271 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 ZNF592Q92610 1267 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 GAL3ST3Q96A11 431 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 RHBDF1Q96CC6 855 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 GPR22Q99680 433 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 LRRC1Q9BTT6 524 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 EFCAB11Q9BUY7 163 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 NPLQ9BXD5 320 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 RHBGQ9H310 441 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 EHD1Q9H4M9 534 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 NT5DC2Q9H857 520 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 SYNPO2LQ9H987 977 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 PRDM9Q9NQV7 894 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 OSGIN2Q9Y236 505 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 MTO1Q9Y2Z2 717 aaKnown RBP15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 CSAG2Q9Y5P2 127 aa15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 RP1L1Q8IWN7 2480 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-217ENST00000491330 IGHV3-20A0A0C4DH32 117 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 FCHO1O14526 889 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 B3GALT2O43825 422 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 BTN3A2P78410 334 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 ZNF460Q14592 562 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 SLMAPQ14BN4 828 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 PDK4Q16654 411 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 XKR6Q5GH73 641 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 MTFR2Q6P444 385 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 QSOX2Q6ZRP7 698 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 LANCL3Q6ZV70 420 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 PDSS2Q86YH6 399 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 CEP97Q8IW35 865 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 LGI4Q8N135 537 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 PPM1NQ8N819 430 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 UTP15Q8TED0 518 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 PTCD3Q96EY7 689 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 CENPKQ9BS16 269 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 RBCK1Q9BYM8 510 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 SLC6A16Q9GZN6 736 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 SUCOQ9UBS9 1254 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 PCDHGB6Q9Y5F9 930 aa15.59■□□□□ 0.09
PDLIM2-217ENST00000491330 SYCE1LA8MT33 242 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 CLEC3AO75596 197 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 EEF1DP29692 281 aaKnown RBP15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 PGGT1BP53609 377 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 RHAGQ02094 409 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 IRF8Q02556 426 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 GUCY2DQ02846 1103 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 SLBPQ14493 270 aaKnown RBP eCLIP15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 ZNF766Q5HY98 468 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 KLC3Q6P597 504 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 GFRALQ6UXV0 394 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 MAMDC2Q7Z304 686 aaPredicted RBP15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 OR5T3Q8NGG3 340 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 ANKRD49Q8WVL7 239 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 NR4A3Q92570 626 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 KIAA1191Q96A73 305 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 TMEM125Q96AQ2 219 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 CCDC77Q9BR77 488 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 MESP1Q9BRJ9 268 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 DEFB126Q9BYW3 111 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 RUBCNLQ9H714 662 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 ZDHHC18Q9NUE0 388 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 MMACHCQ9Y4U1 282 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 ANGPTL3Q9Y5C1 460 aa15.58■□□□□ 0.08
PDLIM2-217ENST00000491330 PHGDHO43175 533 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 LRRTM2O43300 516 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 CCNT2O60583 730 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 SERPINB1P30740 379 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 GGT5P36269 586 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 GDF5P43026 501 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 SLC26A5P58743 744 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 GPX6P59796 221 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 MRPS25P82663 173 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 ZKSCAN8Q15776 578 aaPredicted RBP15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 FAM83EQ2M2I3 478 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 H3F3CQ6NXT2 135 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 SLCO4C1Q6ZQN7 724 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 RPS19BP1Q86WX3 136 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 SPNS2Q8IVW8 549 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 KLHDC8AQ8IYD2 350 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 MOCOSQ96EN8 888 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 FMO2Q99518 471 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 FUT8Q9BYC5 575 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 CAB39LQ9H9S4 337 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 SEC14L3Q9UDX4 400 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 NTNG1Q9Y2I2 539 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 ACOT9Q9Y305 439 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 IKBKGQ9Y6K9 419 aa15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 SETXQ7Z333 2677 aaKnown RBP15.57■□□□□ 0.08
PDLIM2-217ENST00000491330 CCDC88CQ9P219 2028 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 A0A087X1B8 175 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 ERI3O43414 337 aaKnown RBP15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 F10P00742 488 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 C1QAP02745 245 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 CELA2AP08217 269 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 CD1DP15813 335 aa15.56■□□□□ 0.08
PDLIM2-217ENST00000491330 SLC6A12P48065 614 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms