RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CHRFAM7AQ494W8 412 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 ACSF3Q4G176 576 aaPredicted RBP12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 ANKRD20A4Q4UJ75 823 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 KCTD11Q693B1 232 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 B3GNT7Q8NFL0 401 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 OR13J1Q8NGT2 312 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 ASB15Q8WXK1 588 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 TTC1Q99614 292 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 TUBA8Q9NY65 449 aaPredicted RBP12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 JKAMPQ9P055 326 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 SLC2A6Q9UGQ3 507 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 USF3Q68DE3 2245 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 MEGF8Q7Z7M0 2845 aa12.65□□□□□ -0.38
EXOSC3-207ENST00000490516 TCRBV16S1A1N1A0A5B0 115 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 CASKO14936 926 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 SIX3O95343 332 aaPredicted RBP12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 B3GALT4O96024 378 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 IL2RAP01589 272 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 JAK1P23458 1154 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 TIMP3P35625 211 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 PNLIPRP1P54315 467 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 SIX1Q15475 284 aaPredicted RBP12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 HYAL4Q2M3T9 481 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 FAM47EQ6ZV65 393 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF534Q76KX8 674 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 ABHD13Q7L211 337 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 SLC26A11Q86WA9 606 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 OR6P1Q8NGX9 317 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 SLC35G2Q8TBE7 412 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 ISL2Q96A47 359 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 TM4SF19Q96DZ7 209 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 PKP4Q99569 1192 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 EBNA1BP2Q99848 306 aaKnown RBP12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 NECTIN3Q9NQS3 549 aa12.64□□□□□ -0.39
EXOSC3-207ENST00000490516 hCG_1818297A0A087WSY0 165 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 KCNE1BA0A087WTH5 132 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 MYO1CO00159 1063 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 SMAPO00193 183 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 CHST10O43529 356 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 MYO1DO94832 1006 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 MATN4O95460 622 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 TP53P04637 393 aaPredicted RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 RPS15AP62244 130 aaKnown RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 ABATP80404 500 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 SRSF2Q01130 221 aaKnown RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 MEI1Q5TIA1 1274 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 PTRHD1Q6GMV3 140 aaKnown RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 AFTPHQ6ULP2 937 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 QSOX2Q6ZRP7 698 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 OTOAQ7RTW8 1153 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 LACC1Q8IV20 430 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 GPALPP1Q8IXQ4 340 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 KLHDC8BQ8IXV7 354 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 FBXO15Q8NCQ5 510 aaPredicted RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 OR4L1Q8NH43 312 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 SCYL1Q96KG9 808 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 AARSD1Q9BTE6 412 aaKnown RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 RBM24Q9BX46 236 aaKnown RBP12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 SLC6A15Q9H2J7 730 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 GALNT8Q9NY28 637 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 PCDHGB3Q9Y5G1 929 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 NINQ8N4C6 2090 aa12.63□□□□□ -0.39
EXOSC3-207ENST00000490516 IGKV3D-11A0A0A0MRZ8 115 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 E7ENX8 843 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 WWP2O00308 870 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 PRMT5O14744 637 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 TLX2O43763 284 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 SOX30O94993 753 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 SLC16A8O95907 504 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 RFPL3SP0C7P2 107 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 CYLC1P35663 651 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 COILP38432 576 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 TRPC1P48995 793 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 MEF2AQ02078 507 aaPredicted RBP12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 TAP2Q03519 686 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 ARHGAP19Q14CB8 494 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 FASTKD1Q53R41 847 aaKnown RBP12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 THEMIS2Q5TEJ8 643 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 ZNF480Q8WV37 535 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 NCLNQ969V3 563 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 LRRC45Q96CN5 670 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 VMP1Q96GC9 406 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 PANX3Q96QZ0 392 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 RASL10BQ96S79 203 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 FAM118BQ9BPY3 351 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 HEMGNQ9BXL5 484 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 SPTLC3Q9NUV7 552 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 TMEM184CQ9NVA4 438 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 SLC22A7Q9Y694 548 aa12.62□□□□□ -0.39
EXOSC3-207ENST00000490516 DEFB108AA8MXU0 73 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 AHRRA9YTQ3 701 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 CD5LO43866 347 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 LCMT2O60294 686 aaKnown RBP12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 FAM157CP0CG43 387 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 CCL3P10147 92 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 CTSSP25774 331 aa12.61□□□□□ -0.39
EXOSC3-207ENST00000490516 ADARP55265 1226 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms