RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 PPP1R8Q12972 351 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 LCP2Q13094 533 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PRKAA1Q13131 559 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MEP1AQ16819 746 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 HADHQ16836 314 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC36A3Q495N2 470 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 GFI1BQ5VTD9 330 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 NCR3LG1Q68D85 454 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 FAM166AQ6J272 317 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 LCN10Q6JVE6 187 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ARSKQ6UWY0 536 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 Q6ZTK2 550 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 DGLUCYQ7Z3D6 616 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 TMEM126BQ8IUX1 230 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 FOXRED2Q8IWF2 684 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 STHQ8IWL8 128 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SPATA6LQ8N4H0 392 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 FADS6Q8N9I5 356 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 LRRC57Q8N9N7 239 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 VANGL1Q8TAA9 524 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 DQX1Q8TE96 717 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SYN2Q92777 582 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 PEX13Q92968 403 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 NT5C3BQ969T7 300 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MCHR2Q969V1 340 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 TMIGD2Q96BF3 282 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF419Q96HQ0 510 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MED30Q96HR3 178 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 LMLNQ96KR4 655 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 NPFFR1Q9GZQ6 430 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MAGT1Q9H0U3 335 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 RAD21L1Q9H4I0 556 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 TUBG2Q9NRH3 451 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 HYPKQ9NX55 129 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 DONSONQ9NYP3 566 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ATP6V1HQ9UI12 483 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 DBNLQ9UJU6 430 aaKnown RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 RCOR1Q9UKL0 485 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 TSPAN16Q9UKR8 245 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MYO6Q9UM54 1294 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SH3GLB1Q9Y371 365 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 MAB21L2Q9Y586 359 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 KLK4Q9Y5K2 254 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 AHDC1Q5TGY3 1603 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 SRCAPQ6ZRS2 3230 aa2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 POLR3AO14802 1390 aaPredicted RBP2.98□□□□□ -1.93
DEPDC1-204ENST00000489862 ABCC4O15439 1325 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 A0A087X0K7 114 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PRSS51A0A1B0GVH4 220 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 A0A1B0GVT2 93 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 A0A1W2PPW3 197 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 GOLGA8OA6NCC3 632 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 GOLGA8NF8WBI6 632 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NDUFS4O43181 175 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 DCXO43602 365 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ACSL4O60488 711 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NEMFO60524 1076 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SNNO75324 88 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CSDE1O75534 798 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 RHBDL1O75783 438 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 WISP2O76076 250 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TMCC1O94876 653 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 KDM4BO94953 1096 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 OR2T7P0C7T2 308 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 UNGP13051 313 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ANXA8P13928 327 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 YWHAQP27348 245 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ADRA1AP35348 466 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 APOBEC1P41238 236 aaKnown RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 RFX5P48382 616 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ETV1P50549 477 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CARD18P57730 90 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 DLK1P80370 383 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ITGADQ13349 1161 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 NFATC4Q14934 902 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PDK4Q16654 411 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PLEKHO1Q53GL0 409 aaPredicted RBP2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 CCNYL2Q5T2Q4 361 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ANXA8L1Q5VT79 327 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 PLEKHA7Q6IQ23 1121 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MFSD12Q6NUT3 480 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TRIM65Q6PJ69 517 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 B3GNT6Q6ZMB0 384 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SLC16A12Q6ZSM3 486 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TMPRSS11FQ6ZWK6 438 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF534Q76KX8 674 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 TAS2R42Q7RTR8 314 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ARHGAP22Q7Z5H3 698 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 FAM114A1Q8IWE2 563 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 MCPH1Q8NEM0 835 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ACVR1CQ8NER5 493 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 OR2AK2Q8NG84 335 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 OR5M8Q8NGP6 311 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 OR10T2Q8NGX3 314 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 EXD1Q8NHP7 514 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 RAPGEF5Q92565 580 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 RND1Q92730 232 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 SLCO4A1Q96BD0 722 aa2.97□□□□□ -1.93
DEPDC1-204ENST00000489862 ZNF707Q96C28 371 aaPredicted RBP2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms