RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 HPP00738 406 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 TUBBP07437 444 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 KRT15P19012 456 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 HNRNPH1P31943 449 aaKnown RBP16.38■□□□□ 0.21
MDC1-206ENST00000489540 SLCO1A2P46721 670 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 ERCC6LQ2NKX8 1250 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 MFSD4BQ5TF39 518 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 TMEM205Q6UW68 189 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 NDUFAF7Q7L592 441 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 MYLK4Q86YV6 388 aaPredicted RBP16.38■□□□□ 0.21
MDC1-206ENST00000489540 HPS6Q86YV9 775 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 GALNT16Q8N428 558 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 OR2L5Q8NG80 312 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 OR7G3Q8NG95 312 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 OR5T3Q8NGG3 340 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 CAVIN3Q969G5 261 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 ATP6V1E2Q96A05 226 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 TBC1D20Q96BZ9 403 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 REPS1Q96D71 796 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 PEX11GQ96HA9 241 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 NPLQ9BXD5 320 aaPredicted RBP16.38■□□□□ 0.21
MDC1-206ENST00000489540 PARD6BQ9BYG5 372 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 VN1R1Q9GZP7 353 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 AICDAQ9GZX7 198 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 GPR83Q9NYM4 423 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 TMEM216Q9P0N5 145 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.38■□□□□ 0.21
MDC1-206ENST00000489540 TSC22D4Q9Y3Q8 395 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 ZNF451Q9Y4E5 1061 aa16.38■□□□□ 0.21
MDC1-206ENST00000489540 HEMK1Q9Y5R4 338 aaPredicted RBP16.38■□□□□ 0.21
MDC1-206ENST00000489540 V9GYY5 206 aaPredicted RBP16.38■□□□□ 0.21
MDC1-206ENST00000489540 PIEZO2Q9H5I5 2752 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 LOC102723996A0A087X1L8 192 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 A0A1W2PPM1 405 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 A0A1W2PQ72 361 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 ERI3O43414 337 aaKnown RBP16.37■□□□□ 0.21
MDC1-206ENST00000489540 B3GALT4O96024 378 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 FHP07954 510 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 NUDT17P0C025 328 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 SBK3P0C264 359 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 C8orf89P0DMQ9 161 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 PCNAP12004 261 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 JAK1P23458 1154 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 MYBPC3Q14896 1274 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 TMEM35AQ53FP2 167 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 TRIM40Q6P9F5 258 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 CHSY3Q70JA7 882 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 L3MBTL4Q8NA19 623 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 PLPP5Q8NEB5 264 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 ZNF473Q8WTR7 871 aaKnown RBP16.37■□□□□ 0.21
MDC1-206ENST00000489540 ROGDIQ9GZN7 287 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 NOL11Q9H8H0 719 aaKnown RBP16.37■□□□□ 0.21
MDC1-206ENST00000489540 C19orf25Q9UFG5 118 aaPredicted RBP16.37■□□□□ 0.21
MDC1-206ENST00000489540 PCTPQ9UKL6 214 aa16.37■□□□□ 0.21
MDC1-206ENST00000489540 NSG1A0A0A6YYJ2 146 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 SMIM23A6NLE4 172 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 A8MT66 165 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 H0YIV9 168 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 PSMD12O00232 456 aaPredicted RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 DNAJB6O75190 326 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 CLDN9O95484 217 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 TBX6O95947 436 aaPredicted RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 ALPPP05187 535 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 RNH1P13489 461 aaKnown RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 ITGA3P26006 1051 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 PIK3CBP42338 1070 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 CCT5P48643 541 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 CCNG1P51959 295 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 PLA2G16P53816 162 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 OLR1P78380 273 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 PHEXP78562 749 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 VWA5B1Q5TIE3 1220 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 IRAK1BP1Q5VVH5 260 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 FAAH2Q6GMR7 532 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 ADNP2Q6IQ32 1131 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 ABHD17CQ6PCB6 329 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 SH2D5Q6ZV89 423 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 ZNF605Q86T29 641 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 CYP4X1Q8N118 509 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 EPS8L3Q8TE67 593 aaKnown RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 C8orf44Q96CB5 159 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 CMTM7Q96FZ5 175 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 F2RL3Q96RI0 385 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 SMAD5Q99717 465 aaKnown RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 NTMT1Q9BV86 223 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 NUDT9Q9BW91 350 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 C1QTNF3Q9BXJ4 246 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 LANCL2Q9NS86 450 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 C5AR2Q9P296 337 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 SMG1Q96Q15 3661 aaKnown RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 IGHV1-45A0A0A0MS14 117 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 TLDC2A0PJX2 215 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 C4orf51C9J302 202 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 K7EM74 188 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 B3GALT2O43825 422 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 COX6A1P12074 109 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 ICAM2P13598 275 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 ATP5F1P24539 256 aaPredicted RBP16.36■□□□□ 0.21
MDC1-206ENST00000489540 MTTPP55157 894 aa16.36■□□□□ 0.21
MDC1-206ENST00000489540 IFFO1Q0D2I5 559 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms