RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 H2AFYO75367 372 aaKnown RBP13.18□□□□□ -0.3
VTI1A-206ENST00000489142 SUPT3HO75486 399 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 TFEBP19484 476 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 MAOAP21397 527 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 AGTR2P50052 363 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 OR4D2P58180 307 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 ATP6V0D1P61421 351 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 BTN3A2P78410 334 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 IRF9Q00978 393 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 UAP1Q16222 522 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-206ENST00000489142 ABHD17BQ5VST6 288 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 PLAG1Q6DJT9 500 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 TMIGD1Q6UXZ0 262 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 CYS1Q717R9 158 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 VN1R5Q7Z5H4 357 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 CYP4X1Q8N118 509 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 BEST3Q8N1M1 668 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 NOA1Q8NC60 698 aaKnown RBP13.18□□□□□ -0.3
VTI1A-206ENST00000489142 TRPV3Q8NET8 790 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 KIAA1191Q96A73 305 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 PSMG3-AS1Q96PY0 264 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 BARD1Q99728 777 aaKnown RBP13.18□□□□□ -0.3
VTI1A-206ENST00000489142 NPAS2Q99743 824 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 PHACTR1Q9C0D0 580 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 KCNK13Q9HB14 408 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 AGPAT4Q9NRZ5 378 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 IGSF5Q9NSI5 407 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 ANKRD10Q9NXR5 420 aa13.18□□□□□ -0.3
VTI1A-206ENST00000489142 ERRFI1Q9UJM3 462 aaPredicted RBP13.18□□□□□ -0.3
VTI1A-206ENST00000489142 SPTAN1Q13813 2472 aaKnown RBP13.18□□□□□ -0.3
VTI1A-206ENST00000489142 A1L4Q6 167 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 A8MUA0 341 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 MAGEB17A8MXT2 336 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 UBXN8O00124 270 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 E2F3O00716 465 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 ERI3O43414 337 aaKnown RBP13.17□□□□□ -0.3
VTI1A-206ENST00000489142 STK16O75716 305 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 S100BP04271 92 aaPredicted RBP13.17□□□□□ -0.3
VTI1A-206ENST00000489142 SERPINA6P08185 405 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 CYC1P08574 325 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 SMIM10L1P0DMW3 83 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 ICAM2P13598 275 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 CD22P20273 847 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 GGT5P36269 586 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 SKP1P63208 163 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 DOC2AQ14183 400 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
VTI1A-206ENST00000489142 PDK4Q16654 411 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 XKR6Q5GH73 641 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 MROH9Q5TGP6 573 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 SULT1C3Q6IMI6 304 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 FAM180AQ6UWF9 173 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 CA13Q8N1Q1 262 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 TCAIMQ8N3R3 496 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 KIF2BQ8N4N8 673 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 PDPRQ8NCN5 879 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 PLPP5Q8NEB5 264 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 KCTD4Q8WVF5 259 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 HAS2Q92819 552 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 NXNL1Q96CM4 212 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 MS4A6EQ96DS6 147 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 SMIM10Q96HG1 83 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 PTCHD1Q96NR3 888 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 TAAR6Q96RI8 345 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 CNOT10Q9H9A5 744 aaKnown RBP13.17□□□□□ -0.3
VTI1A-206ENST00000489142 STMN3Q9NZ72 180 aa13.17□□□□□ -0.3
VTI1A-206ENST00000489142 PTBP2Q9UKA9 531 aaKnown RBP13.17□□□□□ -0.3
VTI1A-206ENST00000489142 TRAV17A0A0B4J275 112 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 HMX2A2RU54 273 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 LRIT2A6NDA9 550 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 URADA6NGE7 173 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 PSMD12O00232 456 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 PRMT3O60678 531 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 SH3BGRLO75368 114 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 LTA4HP09960 611 aaKnown RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 RNH1P13489 461 aaKnown RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 EPORP19235 508 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 JAK1P23458 1154 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 PLA2G16P53816 162 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 STXBP1P61764 594 aaKnown RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 PMP22Q01453 160 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 ILF2Q12905 390 aaKnown RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 RUNX2Q13950 521 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 WHAMMP3Q1A5X7 153 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 TBC1D1Q86TI0 1168 aaPredicted RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 ISCA2Q86U28 154 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 CRLF3Q8IUI8 442 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 KRT78Q8N1N4 520 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 FAR1Q8WVX9 515 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 GAL3ST3Q96A11 431 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 FAR2Q96K12 515 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 LPAR4Q99677 370 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 PRM3Q9NNZ6 103 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 NECTIN3Q9NQS3 549 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 NINJ2Q9NZG7 142 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 GPRC5BQ9NZH0 403 aa13.16□□□□□ -0.3
VTI1A-206ENST00000489142 DMGDHQ9UI17 866 aaKnown RBP13.16□□□□□ -0.3
VTI1A-206ENST00000489142 ZNF490Q9ULM2 529 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms