RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 SULT1C3Q6IMI6 304 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 TMIGD1Q6UXZ0 262 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 GPSM1Q86YR5 675 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 CTAGE3PQ8IX95 158 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
SRRM1-216ENST00000489130 PDPRQ8NCN5 879 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 TTLQ8NG68 377 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 ZNF354BQ96LW1 612 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 MAGEB10Q96LZ2 347 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-216ENST00000489130 C5orf34Q96MH7 638 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 PITHD1Q9GZP4 211 aaPredicted RBP11.8□□□□□ -0.52
SRRM1-216ENST00000489130 EHD1Q9H4M9 534 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 NT5DC2Q9H857 520 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 CNOT10Q9H9A5 744 aaKnown RBP11.8□□□□□ -0.52
SRRM1-216ENST00000489130 WWOXQ9NZC7 414 aa11.8□□□□□ -0.52
SRRM1-216ENST00000489130 MAST4O15021 2626 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 IGKV3D-11A0A0A0MRZ8 115 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 LRIT2A6NDA9 550 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 PRMT3O60678 531 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 PRAMEF2O60811 474 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 B4GALT2O60909 372 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 H2AFYO75367 372 aaKnown RBP11.79□□□□□ -0.52
SRRM1-216ENST00000489130 RNH1P13489 461 aaKnown RBP11.79□□□□□ -0.52
SRRM1-216ENST00000489130 HNF4AP41235 474 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 MAGEA4P43358 317 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 TDGF1P3P51864 188 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 OR4D2P58180 307 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 SLC26A5P58743 744 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 STXBP1P61764 594 aaKnown RBP11.79□□□□□ -0.52
SRRM1-216ENST00000489130 ACTN3Q08043 901 aaPredicted RBP11.79□□□□□ -0.52
SRRM1-216ENST00000489130 NAB1Q13506 487 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 MEP1AQ16819 746 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 C4orf17Q53FE4 359 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 TOR1AIP1Q5JTV8 583 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 ACER2Q5QJU3 275 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 CCDC25Q86WR0 208 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 CRLF3Q8IUI8 442 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 BEST3Q8N1M1 668 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 KRT78Q8N1N4 520 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 SUN3Q8TAQ9 357 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 NR4A3Q92570 626 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 GAL3ST3Q96A11 431 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 KIAA1191Q96A73 305 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 NPAS2Q99743 824 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 KCNK13Q9HB14 408 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 DNAJC11Q9NVH1 559 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 ABI3Q9P2A4 366 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 PTBP2Q9UKA9 531 aaKnown RBP11.79□□□□□ -0.52
SRRM1-216ENST00000489130 PCDHGB6Q9Y5F9 930 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 HIVEP3Q5T1R4 2406 aa11.79□□□□□ -0.52
SRRM1-216ENST00000489130 SPTAN1Q13813 2472 aaKnown RBP11.79□□□□□ -0.52
SRRM1-216ENST00000489130 SCN3AQ9NY46 2000 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 TCRBV16S1A1N1A0A5B0 115 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 PSMD12O00232 456 aaPredicted RBP11.78□□□□□ -0.52
SRRM1-216ENST00000489130 PRAMEF4O60810 478 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 CLEC3AO75596 197 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 STK16O75716 305 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 FAM155BO75949 473 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 RASAL1O95294 804 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 TBX6O95947 436 aaPredicted RBP11.78□□□□□ -0.52
SRRM1-216ENST00000489130 SLC35E2BP0CK96 405 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 MYBL2P10244 700 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 HNRNPH1P31943 449 aaKnown RBP11.78□□□□□ -0.52
SRRM1-216ENST00000489130 HSPA7P48741 367 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 BTG2P78543 158 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 GUCY2DQ02846 1103 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 CKAP4Q07065 602 aaKnown RBP11.78□□□□□ -0.52
SRRM1-216ENST00000489130 TUBA3CQ13748 450 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 ADPRMQ3LIE5 342 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 FBXO48Q5FWF7 155 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 PRAMEF9Q5VWM5 478 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 FCRLBQ6BAA4 426 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 TUBA3EQ6PEY2 450 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 VN1R5Q7Z5H4 357 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 LGI4Q8N135 537 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 CA13Q8N1Q1 262 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 SLC5A8Q8N695 610 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 PPM1NQ8N819 430 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 ELP5Q8TE02 316 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 FBF1Q8TES7 1133 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 MS4A6EQ96DS6 147 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 WDR34Q96EX3 536 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 PTCHD1Q96NR3 888 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 CD274Q9NZQ7 290 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 RNF112Q9ULX5 631 aa11.78□□□□□ -0.52
SRRM1-216ENST00000489130 A1L4Q6 167 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 SAGE2PA6NJ88 616 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 FAM227AF5H4B4 570 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CDK2AP1O14519 115 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CLGNO14967 610 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 ERI3O43414 337 aaKnown RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 MAN1A2O60476 641 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CRYABP02511 175 aaKnown RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 STSP08842 583 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 EPORP19235 508 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 MAOAP21397 527 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 CRABP2P29373 138 aa11.77□□□□□ -0.53
SRRM1-216ENST00000489130 HPDP32754 393 aaPredicted RBP11.77□□□□□ -0.53
SRRM1-216ENST00000489130 TAS2R50P59544 299 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms