RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 TLR1Q15399 786 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 NR6A1Q15406 480 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 NSDHLQ15738 373 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 BTBD16Q32M84 506 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 SFT2D3Q587I9 215 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 XKR6Q5GH73 641 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 PLAG1Q6DJT9 500 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 ADNP2Q6IQ32 1131 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 CEP128Q6ZU80 1094 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 LRRC70Q7Z2Q7 622 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 TTLQ8NG68 377 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 STAG3L4Q8TBR4 150 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 KCTD4Q8WVF5 259 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 IFT81Q8WYA0 676 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 GAL3ST3Q96A11 431 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 MAGEB10Q96LZ2 347 aaPredicted RBP16.71■□□□□ 0.27
ITGB1-215ENST00000488494 LMF1Q96S06 567 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 FMO2Q99518 471 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 CAPS2Q9BXY5 557 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 EHD1Q9H4M9 534 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 PLA2G3Q9NZ20 509 aa16.71■□□□□ 0.27
ITGB1-215ENST00000488494 PTBP2Q9UKA9 531 aaKnown RBP16.71■□□□□ 0.27
ITGB1-215ENST00000488494 COPG1Q9Y678 874 aaKnown RBP16.71■□□□□ 0.27
ITGB1-215ENST00000488494 CPAMD8Q8IZJ3 1885 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 A0A0G2JN53 185 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 DYTNA2CJ06 578 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 HMX2A2RU54 273 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 MAGEB17A8MXT2 336 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 KIF2AO00139 706 aaPredicted RBP16.7■□□□□ 0.26
ITGB1-215ENST00000488494 PRAMEF4O60810 478 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 B4GALT2O60909 372 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 F10P00742 488 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 ICAM2P13598 275 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 EPORP19235 508 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 CD22P20273 847 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 GSTM2P28161 218 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 ECHS1P30084 290 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 TSFMP43897 325 aaKnown RBP16.7■□□□□ 0.26
ITGB1-215ENST00000488494 SERPINB8P50452 374 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 PRAMEF9Q5VWM5 478 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 PAPD4Q6PIY7 484 aaKnown RBP16.7■□□□□ 0.26
ITGB1-215ENST00000488494 ISCA2Q86U28 154 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 CENPLQ8N0S6 344 aaPredicted RBP16.7■□□□□ 0.26
ITGB1-215ENST00000488494 CATSPER1Q8NEC5 780 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 UBTD2Q8WUN7 234 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 NXNL1Q96CM4 212 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 PTCD3Q96EY7 689 aaKnown RBP16.7■□□□□ 0.26
ITGB1-215ENST00000488494 ATOH8Q96SQ7 321 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 RHBGQ9H310 441 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 CDC42EP4Q9H3Q1 356 aaKnown RBP16.7■□□□□ 0.26
ITGB1-215ENST00000488494 COPG2Q9UBF2 871 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 ACOT9Q9Y305 439 aa16.7■□□□□ 0.26
ITGB1-215ENST00000488494 A0A087X1B8 175 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 PSMD12O00232 456 aaPredicted RBP16.69■□□□□ 0.26
ITGB1-215ENST00000488494 ERI3O43414 337 aaKnown RBP16.69■□□□□ 0.26
ITGB1-215ENST00000488494 RNH1P13489 461 aaKnown RBP16.69■□□□□ 0.26
ITGB1-215ENST00000488494 OR4D2P58180 307 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 BTN3A2P78410 334 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 ZNF33BQ06732 778 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 DOC2AQ14183 400 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 EXT1Q16394 746 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 VN1R5Q7Z5H4 357 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 RELL1Q8IUW5 271 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 MS4A6EQ96DS6 147 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 WDR34Q96EX3 536 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 FAR2Q96K12 515 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 EFCAB11Q9BUY7 163 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 CD244Q9BZW8 370 aa16.69■□□□□ 0.26
ITGB1-215ENST00000488494 PITHD1Q9GZP4 211 aaPredicted RBP16.69■□□□□ 0.26
ITGB1-215ENST00000488494 RP1L1Q8IWN7 2480 aaPredicted RBP16.68■□□□□ 0.26
ITGB1-215ENST00000488494 A0A096LPK6 155 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 LRIT2A6NDA9 550 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 ANKDD1BA6NHY2 528 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 CLEC3AO75596 197 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 AGFG2O95081 481 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 ALDOAP04075 364 aaKnown RBP16.68■□□□□ 0.26
ITGB1-215ENST00000488494 TUBB4AP04350 444 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 C2P06681 752 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 SMIM10L1P0DMW3 83 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 MAOAP21397 527 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 TNFSF10P50591 281 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 IRF8Q02556 426 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
ITGB1-215ENST00000488494 PAGE2BQ5JRK9 111 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 ABHD17BQ5VST6 288 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 FCRLBQ6BAA4 426 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 QSOX2Q6ZRP7 698 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 CCDC91Q7Z6B0 441 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 CA13Q8N1Q1 262 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 PLPP5Q8NEB5 264 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 SMIM10Q96HG1 83 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 SEC16BQ96JE7 1060 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 LPAR4Q99677 370 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 TSPYL1Q9H0U9 437 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 NT5DC2Q9H857 520 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 CLK4Q9HAZ1 481 aaKnown RBP16.68■□□□□ 0.26
ITGB1-215ENST00000488494 OPTCQ9UBM4 332 aa16.68■□□□□ 0.26
ITGB1-215ENST00000488494 SYCE1LA8MT33 242 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 A8MUI8 341 aa16.67■□□□□ 0.26
ITGB1-215ENST00000488494 FAM227AF5H4B4 570 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms