RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ELOCQ15369 112 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 DEPDC1Q5TB30 811 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 KHDRBS2Q5VWX1 349 aaKnown RBP12.15□□□□□ -0.46
NELFE-209ENST00000488426 DLEU7Q6UYE1 221 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 ADCK2Q7Z695 626 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 SLC9B2Q86UD5 537 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 AVL9Q8NBF6 648 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 GTF2H4Q92759 462 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 TMEM125Q96AQ2 219 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 EGLN2Q96KS0 407 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 CENPKQ9BS16 269 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 MCM8Q9UJA3 840 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 PACSIN3Q9UKS6 424 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 MAN2B2Q9Y2E5 1009 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 L3MBTL1Q9Y468 752 aa12.15□□□□□ -0.46
NELFE-209ENST00000488426 TRBV23OR9-2A0A075B6M9 112 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 GNG14A0A1W2PPG7 69 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 FEZF1A0PJY2 475 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ACOT8O14734 319 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 DNAJA2O60884 412 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SH3BGRLO75368 114 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ERN1O75460 977 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 BCAS2O75934 225 aaPredicted RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 KRT36O76013 467 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 FKBP9O95302 570 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 CELA2BP08218 269 aaPredicted RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 FTH1P19P0C7X4 201 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 AHRP35869 848 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 RPL3P39023 403 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 KIR3DL1P43629 444 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 C21orf59P57076 290 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 AP2B1P63010 937 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 RCN1Q15293 331 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ZNF425Q6IV72 752 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 CAMKMTQ7Z624 323 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 GPR180Q86V85 440 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 NAGSQ8N159 534 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 RNF148Q8N7C7 305 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 OR8J3Q8NGG0 315 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 OR8J2Q8NGG1 315 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SLC37A2Q8TED4 501 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 ITCHQ96J02 903 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ELF4Q99607 663 aaPredicted RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 CGREF1Q99674 301 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 DPH7Q9BTV6 452 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 FAM120CQ9NX05 1096 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 CMTM6Q9NX76 183 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ENTPD2Q9Y5L3 495 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 BTN3A3O00478 584 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SCAMP2O15127 329 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 LRATO95237 230 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 TBX6O95947 436 aaPredicted RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 EEFSECP57772 596 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 NXPH1P58417 271 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 BNIP2Q12982 314 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 UGT8Q16880 541 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 NANOGP8Q6NSW7 305 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 IKBIPQ70UQ0 350 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 PAGE2Q7Z2X7 111 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 GKN2Q86XP6 184 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SDR16C5Q8N3Y7 309 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 FAM46DQ8NEK8 389 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.14□□□□□ -0.47
NELFE-209ENST00000488426 DNAJB14Q8TBM8 379 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SAP25Q8TEE9 199 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ZDHHC1Q8WTX9 485 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 NUDT8Q8WV74 236 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 QRFPRQ96P65 431 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 PRPF18Q99633 342 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 MUC13Q9H3R2 512 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 NANOGQ9H9S0 305 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 MYNNQ9NPC7 610 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SLAMF8Q9P0V8 285 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 ANKMY1Q9P2S6 941 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 STX18Q9P2W9 335 aaKnown RBP12.14□□□□□ -0.47
NELFE-209ENST00000488426 AP3M1Q9Y2T2 418 aa12.14□□□□□ -0.47
NELFE-209ENST00000488426 SNRNP200O75643 2136 aaKnown RBP12.13□□□□□ -0.47
NELFE-209ENST00000488426 A0A096LPI6 279 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 H0Y3Z8 333 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 SAP18O00422 153 aaKnown RBP12.13□□□□□ -0.47
NELFE-209ENST00000488426 PLPP1O14494 284 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 SDC3O75056 442 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 STAMBPO95630 424 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 COX7A2P14406 83 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 TCN1P20061 433 aaPredicted RBP12.13□□□□□ -0.47
NELFE-209ENST00000488426 GSTM5P46439 218 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 ARFIP1P53367 373 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 CLDN6P56747 220 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 HNRNPKP61978 463 aaKnown RBP eCLIP12.13□□□□□ -0.47
NELFE-209ENST00000488426 CYP4F2P78329 520 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 MS4A2Q01362 244 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 C1orf61Q13536 156 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 HKDC1Q2TB90 917 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 PGS1Q32NB8 556 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 TMEM35AQ53FP2 167 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 C6orf10Q5SRN2 563 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
NELFE-209ENST00000488426 KIAA1614Q5VZ46 1190 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms