RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 TRMOQ9BU70 441 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 KLHL31Q9H511 634 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 MLXIPLQ9NP71 852 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 TRPC4Q9UBN4 977 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 ZNF282Q9UDV7 671 aaPredicted RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 MRPS2Q9Y399 296 aaKnown RBP14.94□□□□□ -0.02
C9orf3-219ENST00000488186 NAALAD2Q9Y3Q0 740 aa14.94□□□□□ -0.02
C9orf3-219ENST00000488186 HMGB1P1B2RPK0 211 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-219ENST00000488186 SGK494L7N484 410 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 FOXS1O43638 330 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 NPHS1O60500 1241 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ULK1O75385 1050 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 KLHL18O94889 574 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ESRRBO95718 433 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ALBP02768 609 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 CAPN1P07384 714 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 PTPN4P29074 926 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 NEK2P51955 445 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 MC1RQ01726 317 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 DSG2Q14126 1118 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 NCF4Q15080 339 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ZNF385CQ66K41 422 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ADNP2Q6IQ32 1131 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ZNF517Q6ZMY9 492 aaPredicted RBP14.93□□□□□ -0.02
C9orf3-219ENST00000488186 OR2L5Q8NG80 312 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 SLC29A3Q9BZD2 475 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 SHCBP1LQ9BZQ2 653 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 ROGDIQ9GZN7 287 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 OR51B5Q9H339 312 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 DMRT3Q9NQL9 472 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 NMRK1Q9NWW6 199 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 TSC22D4Q9Y3Q8 395 aa14.93□□□□□ -0.02
C9orf3-219ENST00000488186 FAM208BQ5VWN6 2430 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 ZNF860A6NHJ4 632 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MAGEB17A8MXT2 336 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 FOXE1O00358 373 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 GALR3O60755 368 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 SASH3O75995 380 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 ITPKBP27987 946 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 HNRNPH1P31943 449 aaKnown RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 SERPINB5P36952 375 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 SLC18A1P54219 525 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 TMPRSS3P57727 454 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 RPS13P62277 151 aaKnown RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 HYAL2Q12891 473 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MPP2Q14168 576 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 CHI3L2Q15782 390 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 AP5B1Q2VPB7 878 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 HSP90B2PQ58FF3 399 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 DEPDC1Q5TB30 811 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 KHDRBS2Q5VWX1 349 aaKnown RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 FAM198BQ6UWH4 519 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 ZCCHC23Q6ZST2 131 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 PRSS41Q7RTY9 318 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 VN1R5Q7Z5H4 357 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 HOMEZQ8IX15 550 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 ARHGEF39Q8N4T4 335 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 WDR20Q8TBZ3 569 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 AGAP11Q8TF27 550 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 FKBP10Q96AY3 582 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 RGMAQ96B86 450 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MIEF2Q96C03 454 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MS4A6EQ96DS6 147 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 KCNC2Q96PR1 638 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 SERPINI1Q99574 410 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 SH3GL2Q99962 352 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MS4A8Q9BY19 250 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 ACTL8Q9H568 366 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MKKSQ9NPJ1 570 aaPredicted RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 AHSPQ9NZD4 102 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 HCN3Q9P1Z3 774 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 IL17BQ9UHF5 180 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 NXT1Q9UKK6 140 aaKnown RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 PTRH2Q9Y3E5 179 aaKnown RBP14.92□□□□□ -0.02
C9orf3-219ENST00000488186 MAP4K5Q9Y4K4 846 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 PCDHGA6Q9Y5G7 932 aa14.92□□□□□ -0.02
C9orf3-219ENST00000488186 A0A0G2JN53 185 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 A0A1B0GTL3 188 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 ZNF891A8MT65 544 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-219ENST00000488186 PSMD12O00232 456 aaPredicted RBP14.91□□□□□ -0.02
C9orf3-219ENST00000488186 SAP18O00422 153 aaKnown RBP14.91□□□□□ -0.02
C9orf3-219ENST00000488186 MANBAO00462 879 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 B3GALT2O43825 422 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 RDH16O75452 317 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 CHEK2O96017 543 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 PDYNP01213 254 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 ITGAXP20702 1163 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 F8A1P23610 371 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 FOLR3P41439 243 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 CCR10P46092 362 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 MAT1AQ00266 395 aaKnown RBP14.91□□□□□ -0.02
C9orf3-219ENST00000488186 SRSF6Q13247 344 aaKnown RBP14.91□□□□□ -0.02
C9orf3-219ENST00000488186 RCN2Q14257 317 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 TTMPQ5BVD1 217 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 MFSD4BQ5TF39 518 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 CUZD1Q86UP6 607 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 PRSS58Q8IYP2 241 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 RNF175Q8N4F7 328 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 AFAP1L2Q8N4X5 818 aa14.91□□□□□ -0.02
C9orf3-219ENST00000488186 OR51Q1Q8NH59 317 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms