RNA–Protein interactions for RNA: ENST00000487386.1

LINC00888-204, long intergenic non-protein coding RNA 888, humanhuman

BASIC

Gene LINC00888, Length 421 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-204ENST00000487386 CAMK2DQ13557 499 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 FAM189A2Q15884 450 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 FAM166AQ6J272 317 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 PRSS55Q6UWB4 352 aaPredicted RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 PPP1R21Q6ZMI0 780 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 ERN2Q76MJ5 926 aaKnown RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 CCDC186Q7Z3E2 898 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 NRARPQ7Z6K4 114 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 P2RY8Q86VZ1 359 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 CDC20BQ86Y33 519 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 FAM219AQ8IW50 185 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 RASL10AQ92737 203 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 PYCR2Q96C36 320 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 FER1L6-AS2Q96M78 137 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 SOSTQ9BQB4 213 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 KATNB1Q9BVA0 655 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 RIMS4Q9H426 269 aaPredicted RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 CCDC177Q9NQR7 707 aaPredicted RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 PHPT1Q9NRX4 125 aaPredicted RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 PKD2L2Q9NZM6 624 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 HACD3Q9P035 362 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 CTSZQ9UBR2 303 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 LNPEPQ9UIQ6 1025 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 ADGRB1O14514 1584 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 TNRQ92752 1358 aa3.36□□□□□ -1.87
LINC00888-204ENST00000487386 XRN1Q8IZH2 1706 aaKnown RBP3.36□□□□□ -1.87
LINC00888-204ENST00000487386 A2ML1A8K2U0 1454 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 SCAF11Q99590 1463 aaKnown RBP3.35□□□□□ -1.87
LINC00888-204ENST00000487386 NRXN1Q9ULB1 1477 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 A0A087WV48 116 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 GLTPD2A6NH11 291 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 SLC1A7O00341 560 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 SURF4O15260 269 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 ECE2O60344 883 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 SNAP91O60641 907 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 PRAF2O60831 178 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 SAP30O75446 220 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 YES1P07947 543 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 CAPN2P17655 700 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 EPORP19235 508 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 CDX1P47902 265 aaPredicted RBP3.35□□□□□ -1.87
LINC00888-204ENST00000487386 DHODHQ02127 395 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 TAZQ16635 292 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 DUSP5Q16690 384 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 SPECC1Q5M775 1068 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 LCLAT1Q6UWP7 414 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 AMIGO1Q86WK6 493 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 CCDC89Q8N998 374 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 OR10G7Q8NGN6 311 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 ATP8B4Q8TF62 1192 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 CHURC1Q8WUH1 139 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 GNB4Q9HAV0 340 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.35□□□□□ -1.87
LINC00888-204ENST00000487386 NPHP3Q7Z494 1330 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 ITSN1Q15811 1721 aa3.35□□□□□ -1.87
LINC00888-204ENST00000487386 ADGRB2O60241 1585 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 CDC42BPGQ6DT37 1551 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 TOPAZ1Q8N9V7 1692 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 NALCNQ8IZF0 1738 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 A0A087WZ39 114 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 IGHV3-20A0A0C4DH32 117 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 A0A1W2PPW3 197 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ANXA2P2A6NMY6 339 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 HMGB1P1B2RPK0 211 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 F8VVB4 439 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 F8VWA3 439 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 RNF103O00237 685 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 LUC7L3O95232 432 aaKnown RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 SELEP16581 610 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 PTAFRP25105 342 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 PTGER3P43115 390 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ZNF41P51814 821 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 SULT2A1Q06520 285 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 RIGQ13278 110 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ZNF177Q13360 481 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 UGCGQ16739 394 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 LBHQ53QV2 105 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ATP1A1-AS1Q5TC04 95 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 SUSD1Q6UWL2 747 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 PHC2Q8IXK0 858 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 SLC22A15Q8IZD6 547 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 APCDD1Q8J025 514 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ABHD12Q8N2K0 398 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 TCEANCQ8N8B7 351 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 Q8NFD4 153 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 OR4C15Q8NGM1 316 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 OCC1Q8TAD7 63 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 NSMAFQ92636 917 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 RAD54LQ92698 747 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 NXPE2Q96DL1 559 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 RBM41Q96IZ5 413 aaKnown RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 GTPBP2Q9BX10 602 aaKnown RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 RAB11FIP5Q9BXF6 653 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 TMX4Q9H1E5 349 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 SNX25Q9H3E2 840 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 NFKBIL1Q9UBC1 381 aaPredicted RBP3.34□□□□□ -1.87
LINC00888-204ENST00000487386 SNX7Q9UNH6 387 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 ZHX2Q9Y6X8 837 aa3.34□□□□□ -1.87
LINC00888-204ENST00000487386 NEDD4P46934 1319 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms