RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GHDCQ8N2G8 530 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 PIH1D2Q8WWB5 315 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 RAB8BQ92930 207 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 PEX13Q92968 403 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 USP7Q93009 1102 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 DIRAS2Q96HU8 199 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 DHRS1Q96LJ7 313 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 SMG9Q9H0W8 520 aaKnown RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 SMURF1Q9HCE7 757 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 COMMD3Q9UBI1 195 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 LRFN2Q9ULH4 789 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 ANKRD36A6QL64 1941 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 STATHP02808 62 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CHRNB1P11230 501 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CBLP22681 906 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 HTR2BP41595 481 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 GPLD1P80108 840 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 SMAD3P84022 425 aaKnown RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CAMK2BQ13554 666 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 INSL4Q14641 139 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 KCNA10Q16322 511 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 MPPE1Q53F39 396 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 PYDC2Q56P42 97 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 LDLRAD1Q5T700 205 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CPTPQ5TA50 214 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 SERINC5Q86VE9 423 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 RNF130Q86XS8 419 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 NLGN4YQ8NFZ3 816 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 IPCEF1Q8WWN9 437 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 C8orf48Q96LL4 319 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 LHX3Q9UBR4 397 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 PCDHGB3Q9Y5G1 929 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 PEX16Q9Y5Y5 336 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CASP8AP2Q9UKL3 1982 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 SYNDIG1LA6NDD5 238 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 AOC2O75106 756 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CYP17A1P05093 508 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CCNYL3P0C7X3 344 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 ACRV1P26436 265 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 BDKRB1P46663 353 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 ITGA1P56199 1179 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 TUBA1BP68363 451 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF45Q02386 682 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 CSTF3Q12996 717 aaKnown RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF385BQ569K4 471 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 RNASE12Q5GAN4 147 aaKnown RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 TUBA1AQ71U36 451 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 ZNF438Q7Z4V0 828 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 AUTS2Q8WXX7 1259 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 OTULINQ96BN8 352 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 MCCC1Q96RQ3 725 aaPredicted RBP11.9□□□□□ -0.5
HSPG2-211ENST00000486901 OR51B5Q9H339 312 aa11.9□□□□□ -0.5
HSPG2-211ENST00000486901 PATJQ8NI35 1801 aa11.9□□□□□ -0.51
HSPG2-211ENST00000486901 ISPDA4D126 451 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 GSAPA4D1B5 854 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 DNAJB5O75953 348 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 NCR1O76036 304 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 AOAHP28039 575 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 CXCR4P61073 352 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 HBA1P69905 142 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 HNRNPA0Q13151 305 aaKnown RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 RGNQ15493 299 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF544Q6NX49 715 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 MRPL10Q7Z7H8 261 aaKnown RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 PLPP6Q8IY26 295 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 UBQLNLQ8IYU4 475 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 COL21A1Q96P44 957 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 POLR2J2Q9GZM3 115 aaKnown RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 MTG2Q9H4K7 406 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 SGK2Q9HBY8 427 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 ZSCAN5BA6NJL1 495 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 CLDN11O75508 207 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 NTN1O95631 604 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 IL7P13232 177 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 B4GALNT1Q00973 533 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 FADDQ13158 208 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 DOC2AQ14183 400 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 SMU1Q2TAY7 513 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 BRAT1Q6PJG6 821 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 DEF8Q6ZN54 512 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 TMCO2Q7Z6W1 182 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 ZNF366Q8N895 744 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 TM9SF2Q99805 663 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 NTMT1Q9BV86 223 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 PRR14Q9BWN1 585 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 PCDHB1Q9Y5F3 818 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 MYOFQ9NZM1 2061 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 A0A0G2JN53 185 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 ADAMDEC1O15204 470 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 PQBP1O60828 265 aaKnown RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 OAZ2O95190 189 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 CHI3L1P36222 383 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 PTPN5P54829 565 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 GALK2Q01415 458 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 TBCEQ15813 527 aaPredicted RBP11.89□□□□□ -0.51
HSPG2-211ENST00000486901 DUSP7Q16829 419 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 OR2G6Q5TZ20 316 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 TXNDC8Q6A555 127 aa11.89□□□□□ -0.51
HSPG2-211ENST00000486901 FAHD1Q6P587 224 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms