RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 ADAMDEC1O15204 470 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 NBNO60934 754 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 LGI1O95970 557 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 CHRM5P08912 532 aaPredicted RBP10.24□□□□□ -0.77
CCDC171-208ENST00000486641 HBQ1P09105 142 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 EBLN1P0CF75 366 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 DDCP20711 480 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 CPT1AP50416 773 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 CLCN4P51793 760 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 AFF1P51825 1210 aaKnown RBP10.24□□□□□ -0.77
CCDC171-208ENST00000486641 DGKEP52429 567 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 RAB25P57735 213 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 CDC42P60953 191 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 SPIBQ01892 262 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 SERINC3Q13530 473 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 VEZF1Q14119 521 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 ZNF235Q14590 738 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 AANATQ16613 207 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 MS4A13Q5J8X5 152 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 DDI2Q5TDH0 399 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 LIPKQ5VXJ0 399 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 TAPT1Q6NXT6 567 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 MZT2BQ6NZ67 158 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 HSDL2Q6YN16 418 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 GPR155Q7Z3F1 870 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 DDX53Q86TM3 631 aaKnown RBP10.24□□□□□ -0.77
CCDC171-208ENST00000486641 COMMD7Q86VX2 200 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 KIF18BQ86Y91 864 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 Q8N402 240 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 METTL2AQ96IZ6 378 aaKnown RBP10.24□□□□□ -0.77
CCDC171-208ENST00000486641 NTMT1Q9BV86 223 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 TRIM62Q9BVG3 475 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 APOL5Q9BWW9 433 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 LIN7BQ9HAP6 207 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 NDUFB11Q9NX14 153 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 MALT1Q9UDY8 824 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 TRPS1Q9UHF7 1281 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 VPS9D1Q9Y2B5 631 aa10.24□□□□□ -0.77
CCDC171-208ENST00000486641 C2orf81A6NN90 581 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PCDH17O14917 1159 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 LYRM1O43325 122 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TPST2O60704 377 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ENTPD6O75354 484 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 SLC43A1O75387 559 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 GCM2O75603 506 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 IL1AP01583 271 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 HLA-DQB1P01920 261 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PRKAR1AP10644 381 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PRPS2P11908 318 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 HLA-EP13747 358 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 CNR2P34972 360 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 KIR3DL1P43629 444 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ZXDBP98169 803 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 GALEQ14376 348 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ZNF628Q5EBL2 1059 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TRIQKQ629K1 86 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 C22orf42Q6IC83 251 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PAQR6Q6TCH4 344 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PRSS42Q7Z5A4 293 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TRIM69Q86WT6 500 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PHC2Q8IXK0 858 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 MICALL2Q8IY33 904 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 CLECL1Q8IZS7 167 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ZNF431Q8TF32 576 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 AKAP1Q92667 903 aaKnown RBP eCLIP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TMEM203Q969S6 136 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 KIAA1143Q96AT1 154 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 APIPQ96GX9 242 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 HHIPQ96QV1 700 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 IL4I1Q96RQ9 567 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TM9SF2Q99805 663 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 POLR2J2Q9GZM3 115 aaKnown RBP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 SLC25A19Q9HC21 320 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 B3GAT2Q9NPZ5 323 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 WWOXQ9NZC7 414 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TMCC3Q9ULS5 477 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 A0A1W2PQH9 124 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 J3KTA2 159 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 YY2O15391 372 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ORC5O43913 435 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 HCN1O60741 890 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 RAMP2O60895 175 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 SCN2BO60939 215 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 OPN1SWP03999 348 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 WNT3P56703 355 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 SELENOWP63302 87 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 KCNC3Q14003 757 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ANGPT1Q15389 498 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 P2RY14Q15391 338 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 BRAT1Q6PJG6 821 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 KIAA1324Q6UXG2 1013 aaKnown RBP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 LRRTM3Q86VH5 581 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 CLDN22Q8N7P3 220 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 ZNF366Q8N895 744 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TMEM145Q8NBT3 493 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 MTERF3Q96E29 417 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 PPP1R3EQ9H7J1 279 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 HEXA-AS1Q9H8Q6 139 aa10.23□□□□□ -0.77
CCDC171-208ENST00000486641 TLR8Q9NR97 1041 aaKnown RBP10.23□□□□□ -0.77
CCDC171-208ENST00000486641 FZD4Q9ULV1 537 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms