RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PDK4Q16654 411 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 IGFL2Q6UWQ7 119 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 ISCA2Q86U28 154 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 CREB3L4Q8TEY5 395 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 IMMP1LQ96LU5 166 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 PTCHD1Q96NR3 888 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 CD244Q9BZW8 370 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 SLC6A16Q9GZN6 736 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 VPS11Q9H270 941 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 KCNK13Q9HB14 408 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 STMN3Q9NZ72 180 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 GPRC5BQ9NZH0 403 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 PTBP2Q9UKA9 531 aaKnown RBP16.63■□□□□ 0.25
COL6A1-204ENST00000486023 PCDHGA10Q9Y5H3 936 aa16.63■□□□□ 0.25
COL6A1-204ENST00000486023 C4orf51C9J302 202 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 ERI3O43414 337 aaKnown RBP16.62■□□□□ 0.25
COL6A1-204ENST00000486023 SH3BGRLO75368 114 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 C2P06681 752 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 IL10P22301 178 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 JAK1P23458 1154 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 TYK2P29597 1187 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 GGT5P36269 586 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 PLA2G16P53816 162 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 STXBP1P61764 594 aaKnown RBP16.62■□□□□ 0.25
COL6A1-204ENST00000486023 RHAGQ02094 409 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 IRF8Q02556 426 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 SRSF1Q07955 248 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL6A1-204ENST00000486023 CHIT1Q13231 466 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 FHL5Q5TD97 284 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 ABHD17BQ5VST6 288 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 ADNP2Q6IQ32 1131 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 CEP128Q6ZU80 1094 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 KLHDC8AQ8IYD2 350 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 FAM26EQ8N5C1 309 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 KIF18AQ8NI77 898 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 OR1F2PQ96R84 312 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 FMO2Q99518 471 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 CDC42EP4Q9H3Q1 356 aaKnown RBP16.62■□□□□ 0.25
COL6A1-204ENST00000486023 SNX15Q9NRS6 342 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 LANCL2Q9NS86 450 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 NUDT4Q9NZJ9 180 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 NTNG1Q9Y2I2 539 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 ASB1Q9Y576 335 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 ANGPTL3Q9Y5C1 460 aa16.62■□□□□ 0.25
COL6A1-204ENST00000486023 RP1L1Q8IWN7 2480 aaPredicted RBP16.62■□□□□ 0.25
COL6A1-204ENST00000486023 A0A087X1B8 175 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 A0A096LPK6 155 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 LRIT2A6NDA9 550 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 POC1B-GALNT4F8VUJ3 575 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PRMT3O60678 531 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PRAMEF4O60810 478 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 AGFG2O95081 481 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 WDPCPO95876 746 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PCNAP12004 261 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 MAOAP21397 527 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 HNRNPH1P31943 449 aaKnown RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 AP2B1P63010 937 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 ELOAQ14241 798 aaKnown RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 HIST2H2ACQ16777 129 aaPredicted RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 FAM83EQ2M2I3 478 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 CDKL4Q5MAI5 379 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PRAMEF9Q5VWM5 478 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 HIST2H2AA3Q6FI13 130 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 NIPAL1Q6NVV3 410 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PAPD4Q6PIY7 484 aaKnown RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 RIPOR1Q6ZS17 1223 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 MYLK4Q86YV6 388 aaPredicted RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PDPRQ8NCN5 879 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PLPP5Q8NEB5 264 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 TTLQ8NG68 377 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 PTCD3Q96EY7 689 aaKnown RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 LPAR4Q99677 370 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 AICDAQ9GZX7 198 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 AGPAT4Q9NRZ5 378 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 TEKT2Q9UIF3 430 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 ZNF490Q9ULM2 529 aaPredicted RBP16.61■□□□□ 0.25
COL6A1-204ENST00000486023 IKBKGQ9Y6K9 419 aa16.61■□□□□ 0.25
COL6A1-204ENST00000486023 A0A1W2PQ72 361 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 HMX2A2RU54 273 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 MAGEB17A8MXT2 336 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 KIF2AO00139 706 aaPredicted RBP16.6■□□□□ 0.25
COL6A1-204ENST00000486023 KERAO60938 352 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 INHBAP08476 426 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 SMIM10L1P0DMW3 83 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 RNH1P13489 461 aaKnown RBP16.6■□□□□ 0.25
COL6A1-204ENST00000486023 GFAPP14136 432 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 SOX11P35716 441 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 MSH2P43246 934 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 SRSF11Q05519 484 aaKnown RBP16.6■□□□□ 0.25
COL6A1-204ENST00000486023 PFKFB4Q16877 469 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 PLAG1Q6DJT9 500 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 CA13Q8N1Q1 262 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 TEX9Q8N6V9 391 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 GRHL3Q8TE85 626 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 GAL3ST3Q96A11 431 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 MS4A6EQ96DS6 147 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 SMIM10Q96HG1 83 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 F2RL3Q96RI0 385 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 ATOH8Q96SQ7 321 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 REXO4Q9GZR2 422 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms