RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, human

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAP-211	ENST00000485967	IL1RN	P18510	177 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	PTX3	P26022	381 aa	Predicted RBP	13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	PIK3CB	P42338	1070 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	ETV4	P43268	484 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	KRT6C	P48668	564 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	NEK2	P51955	445 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	RAB8A	P61006	207 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	OCA2	Q04671	838 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	GGTA1P	Q4G0N0	100 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	DEFB134	Q4QY38	66 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	FRG2	Q64ET8	278 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF385C	Q66K41	422 aa	Predicted RBP	13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	ADNP2	Q6IQ32	1131 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	NIPAL1	Q6NVV3	410 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	LETMD1	Q6P1Q0	360 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	TRIM40	Q6P9F5	258 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	OVCH1	Q7RTY7	1134 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	SYVN1	Q86TM6	617 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF843	Q8N446	348 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	DTWD1	Q8N5C7	304 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	CDYL2	Q8N8U2	506 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	SRFBP1	Q8NEF9	429 aa	Known RBP	13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	OR9A4	Q8NGU2	314 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	HUS1B	Q8NHY5	278 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	MGARP	Q8TDB4	240 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	UTP15	Q8TED0	518 aa	Known RBP	13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF473	Q8WTR7	871 aa	Known RBP	13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	FRG2B	Q96QU4	278 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	F2RL3	Q96RI0	385 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	CENPK	Q9BS16	269 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	GPR87	Q9BY21	358 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	SHCBP1L	Q9BZQ2	653 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	EML4	Q9HC35	981 aa	Known RBP	13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	MLXIPL	Q9NP71	852 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	TRPS1	Q9UHF7	1281 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	NAALAD2	Q9Y3Q0	740 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	TSC22D4	Q9Y3Q8	395 aa		13.13	□□□□□ -0.31
SCAP-211	ENST00000485967	HECTD1	Q9ULT8	2610 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	BSN	Q9UPA5	3926 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967		A0A088AWK7	358 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967		H0YIG0	161 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	SGK494	L7N484	410 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ERVH48-1	M5A8F1	160 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	BIRC5	O15392	142 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ERI3	O43414	337 aa	Known RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	FOXS1	O43638	330 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	NPHS1	O60500	1241 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	SASH3	O75995	380 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	KLHL18	O94889	574 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ZIC2	O95409	532 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	NSA2	O95478	260 aa	Known RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ESRRB	O95718	433 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ENO1	P06733	434 aa	Known RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	CAPN1	P07384	714 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	RAB40AL	P0C0E4	278 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	PLA2G2A	P14555	144 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF10	P21506	573 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	PTPN4	P29074	926 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	RAP1GDS1	P52306	607 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	PLA2G16	P53816	162 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC18A1	P54219	525 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	RPS13	P62277	151 aa	Known RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	BTN3A2	P78410	334 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	HYAL2	Q12891	473 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	MPP2	Q14168	576 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	TMEM35A	Q53FP2	167 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	C10orf62	Q5T681	223 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF517	Q6ZMY9	492 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	CCDC81	Q6ZN84	652 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	VN1R5	Q7Z5H4	357 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ARHGEF39	Q8N4T4	335 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ENDOV	Q8N8Q3	282 aa	Known RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	SELENOM	Q8WWX9	145 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	GAL3ST3	Q96A11	431 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	MS4A6E	Q96DS6	147 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	SH3GL2	Q99962	352 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	TRMO	Q9BU70	441 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	SLC29A3	Q9BZD2	475 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	OR51B5	Q9H339	312 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	COPS7B	Q9H9Q2	264 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	TRPC4	Q9UBN4	977 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.12	□□□□□ -0.31
SCAP-211	ENST00000485967	PADI2	Q9Y2J8	665 aa		13.12	□□□□□ -0.31
SCAP-211	ENST00000485967		A0A1B0GTL3	188 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	MAGEB17	A8MXT2	336 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	FOXE1	O00358	373 aa	Predicted RBP	13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	GALR3	O60755	368 aa	Predicted RBP	13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ULK1	O75385	1050 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ONECUT2	O95948	504 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	ALB	P02768	609 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	HNRNPH1	P31943	449 aa	Known RBP	13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	CCR10	P46092	362 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	UCN	P55089	124 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	TMPRSS3	P57727	454 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	DSG2	Q14126	1118 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	NCF4	Q15080	339 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	CHI3L2	Q15782	390 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	AP5B1	Q2VPB7	878 aa		13.11	□□□□□ -0.31
SCAP-211	ENST00000485967	TTMP	Q5BVD1	217 aa		13.11	□□□□□ -0.31

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