RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ZNF366Q8N895 744 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 ZNF680Q8NEM1 530 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 TMIEQ8NEW7 156 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 GPR156Q8NFN8 814 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 TTLQ8NG68 377 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RAB3IL1Q8TBN0 382 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 SELENOMQ8WWX9 145 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RTP4Q96DX8 246 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RNFT2Q96EX2 444 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 PERPQ96FX8 193 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 SLC41A2Q96JW4 573 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 MRGPRX1Q96LB2 322 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 LURAP1Q96LR2 239 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 C9orf72Q96LT7 481 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 C12orf66Q96MD2 445 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 COQ10AQ96MF6 247 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 ZNF607Q96SK3 696 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RBM4BQ9BQ04 359 aaKnown RBP3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM213AQ9BRX8 229 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RBM4Q9BWF3 364 aaKnown RBP3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 TMEM39BQ9GZU3 492 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 HAPLN2Q9GZV7 340 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 CDT1Q9H211 546 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 OR51V1Q9H2C8 321 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 MTIF3Q9H2K0 278 aaKnown RBP3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RGCCQ9H4X1 137 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 CYP3A43Q9HB55 503 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RAVER2Q9HCJ3 691 aaKnown RBP3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 PNO1Q9NRX1 252 aaKnown RBP3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 MAN2C1Q9NTJ4 1040 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RNF146Q9NTX7 359 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 FBXO34Q9NWN3 711 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 TAS2R7Q9NYW3 318 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 RBAKQ9NYW8 714 aaPredicted RBP3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 MGAT4CQ9UBM8 478 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 CTSFQ9UBX1 484 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 SLC9A2Q9UBY0 812 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 KCNN3Q9UGI6 736 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 VPS51Q9UID3 782 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 SCOCQ9UIL1 159 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 USP18Q9UMW8 372 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 CDC14AQ9UNH5 594 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 PADI2Q9Y2J8 665 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 IFT52Q9Y366 437 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 L3MBTL1Q9Y468 752 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 PCDHB1Q9Y5F3 818 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 LIPGQ9Y5X9 500 aa3.88□□□□□ -1.79
PRPF38B-205ENST00000485810 PARP14Q460N5 1801 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 ARID2Q68CP9 1835 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 PTPRJQ12913 1337 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 LOC285556D6RIA3 1793 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 RLFQ13129 1914 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 COL4A5P29400 1685 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 IGKV6-21A0A0C4DH24 114 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 A0A0J9YYE9 177 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 GSTTP1A0A1W2PQM5 241 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 OR2A25A4D2G3 310 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 TUBAL3A6NHL2 446 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 OR6C70A6NIJ9 312 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 SNTNA6NMZ2 147 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CENPBD1B2RD01 187 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 K7ERI5 159 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 BTN3A1O00481 513 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 HS3ST1O14792 307 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CHADO15335 359 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 GATCO43716 136 aaKnown RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CCDC22O60826 627 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 FAM20BO75063 409 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 LRCH4O75427 683 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CSDE1O75534 798 aaKnown RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 RPP14O95059 124 aaKnown RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CCNB2O95067 398 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 OR2C1O95371 312 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 TRBC1P01850 177 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 C1QAP02745 245 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 ACAA1P09110 424 aaPredicted RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 HSMCR30P0CW71 290 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 VSIG10L2P0DP72 767 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CD19P15391 556 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 RPA2P15927 270 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 HOXB8P17481 243 aaPredicted RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CD58P19256 250 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 ATP6V1C1P21283 382 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 KDELR1P24390 212 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 ACP1P24666 158 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CYP2F1P24903 491 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 RPS12P25398 132 aaKnown RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 MARK3P27448 753 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 IL1R2P27930 398 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 RPA3P35244 121 aaPredicted RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 PCK1P35558 622 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 PBX3P40426 434 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 FRKP42685 505 aaPredicted RBP3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 KIR2DL3P43628 341 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 SLC1A6P48664 564 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 RAP1GDS1P52306 607 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CLDN8P56748 225 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 SKP1P63208 163 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 OGDHQ02218 1023 aa3.87□□□□□ -1.79
PRPF38B-205ENST00000485810 CD69Q07108 199 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms