RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CHN1P15882 459 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 AGXTP21549 392 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 BGNP21810 368 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 FBLP22087 321 aaKnown RBP11.26□□□□□ -0.61
APTX-227ENST00000485479 CERS1P27544 350 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 WDR4P57081 412 aaKnown RBP11.26□□□□□ -0.61
APTX-227ENST00000485479 BTN3A2P78410 334 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 PWP1Q13610 501 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 FAAH2Q6GMR7 532 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 ZNF793Q6ZN11 406 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 NT5CQ8TCD5 201 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 PROKR1Q8TCW9 393 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 KIAA1143Q96AT1 154 aaPredicted RBP11.26□□□□□ -0.61
APTX-227ENST00000485479 THAP11Q96EK4 314 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 LRFN5Q96NI6 719 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 MS4A8Q9BY19 250 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 ANKHQ9HCJ1 492 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 DMRT3Q9NQL9 472 aa11.26□□□□□ -0.61
APTX-227ENST00000485479 A0A087WV48 116 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 TMEM8BA6NDV4 472 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 PRPF4O43172 522 aaKnown RBP eCLIP11.25□□□□□ -0.61
APTX-227ENST00000485479 ITM2AO43736 263 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 SERPINA6P08185 405 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 ALOX12P18054 663 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 DNAJB13P59910 316 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 LAPTM5Q13571 262 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 NDUFA9Q16795 377 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 FRG2Q64ET8 278 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 CCDC81Q6ZN84 652 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 UBE3DQ7Z6J8 389 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 CROCCP2Q86T23 111 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 NUDCD3Q8IVD9 361 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 CCDC126Q96EE4 140 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 PEX11GQ96HA9 241 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 ATP6V1G3Q96LB4 118 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 FRG2BQ96QU4 278 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 ZNF382Q96SR6 550 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 SH3GL2Q99962 352 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 MRPL1Q9BYD6 325 aaKnown RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 C20orf27Q9GZN8 174 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 ELOVL6Q9H5J4 265 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 PTRH2Q9Y3E5 179 aaKnown RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 PCDHGA11Q9Y5H2 935 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 ACTL7BQ9Y614 415 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 C9J4A7 227 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 FAM227AF5H4B4 570 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 H0YIV9 168 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 TXNDC9O14530 226 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 GALR3O60755 368 aaPredicted RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 ALOX12BO75342 701 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 CLEC3AO75596 197 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 KLF7O75840 302 aaPredicted RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 XCR1P46094 333 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 MAP7Q14244 749 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 ARL13AQ5H913 290 aaPredicted RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 MFSD4BQ5TF39 518 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 METTL2BQ6P1Q9 378 aaKnown RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 CUZD1Q86UP6 607 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 CNPY4Q8N129 248 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 GOLGA6L1Q8N7Z2 621 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 PPP1R14CQ8TAE6 165 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 METTL6Q8TCB7 284 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 SELENOMQ8WWX9 145 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 SPSB2Q99619 263 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 DPH1Q9BZG8 443 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 STMN4Q9H169 189 aaPredicted RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 VIPAS39Q9H9C1 493 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 SSU72Q9NP77 194 aaKnown RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 GPN3Q9UHW5 284 aaPredicted RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 MID2Q9UJV3 735 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 TCFL5Q9UL49 500 aa11.25□□□□□ -0.61
APTX-227ENST00000485479 FARSAQ9Y285 508 aaKnown RBP11.25□□□□□ -0.61
APTX-227ENST00000485479 MYOCOSA0A1B0GUC4 107 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 PLPP1O14494 284 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 TM9SF1O15321 606 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 UGDHO60701 494 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 PRKRAO75569 313 aaKnown RBP11.24□□□□□ -0.61
APTX-227ENST00000485479 ZWINTO95229 277 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 NSA2O95478 260 aaKnown RBP11.24□□□□□ -0.61
APTX-227ENST00000485479 ESRRBO95718 433 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 MLYCDO95822 493 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 DHRS4L1P0CG22 281 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 NEFHP12036 1026 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 PTPN4P29074 926 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 HMOX2P30519 316 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 OTX2P32243 289 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 AVPR1BP47901 424 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 RPS15P62841 145 aaKnown RBP11.24□□□□□ -0.61
APTX-227ENST00000485479 HMGCS1Q01581 520 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 KLC1Q07866 573 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 PCDH1Q08174 1060 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 FAM53BQ14153 422 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 ABRAXAS2Q15018 415 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 NKG7Q16617 165 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 COL28A1Q2UY09 1125 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 AGBL2Q5U5Z8 902 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 GARNL3Q5VVW2 1013 aa11.24□□□□□ -0.61
APTX-227ENST00000485479 KHDRBS2Q5VWX1 349 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms