RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 FAM53BQ14153 422 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 HERC3Q15034 1050 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 MUM1Q2TAK8 710 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 AP5B1Q2VPB7 878 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 ATP6AP1LQ52LC2 224 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 DCAF12Q5T6F0 453 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 FOXR1Q6PIV2 292 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 CEACAM20Q6UY09 585 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 LARP4Q71RC2 724 aaKnown RBP eCLIP16.7■□□□□ 0.26
CHMP3-207ENST00000485465 TMEM126BQ8IUX1 230 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 METTL4Q8N3J2 472 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 PMEPA1Q969W9 287 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 METTL2AQ96IZ6 378 aaKnown RBP16.7■□□□□ 0.26
CHMP3-207ENST00000485465 PPP3R2Q96LZ3 170 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 KCNC2Q96PR1 638 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 C17orf62Q9BQA9 187 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 TBCDQ9BTW9 1192 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 FAM107BQ9H098 131 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 KCNK13Q9HB14 408 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 PRDM7Q9NQW5 492 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 C1orf109Q9NX04 203 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 KLHL14Q9P2G3 628 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 GIMAP2Q9UG22 337 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 PCDHB3Q9Y5E6 796 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 SPEGQ15772 3267 aa16.7■□□□□ 0.26
CHMP3-207ENST00000485465 A0A0G2JN53 185 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 GOLGA8QA0A0J9YX86 632 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 GOLGA8OA6NCC3 632 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 GOLGA8NF8WBI6 632 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 RTCAO00442 366 aaKnown RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 SEC22BO75396 215 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 B3GALT4O96024 378 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 PRR35P0CG20 571 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 BSGP35613 385 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 BTN3A2P78410 334 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 SF3A3Q12874 501 aaKnown RBP eCLIP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 COL9A2Q14055 689 aaPredicted RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 KIAA0040Q15053 153 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 GALNTL6Q49A17 601 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 SPIN4Q56A73 249 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 C6orf136Q5SQH8 315 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 OR4C11Q6IEV9 310 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 TTLL10Q6ZVT0 673 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 COMMD6Q7Z4G1 85 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ZFAND4Q86XD8 727 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 C1orf52Q8N6N3 182 aaKnown RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ACTRT2Q8TDY3 377 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 STON2Q8WXE9 905 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 QRFPRQ96P65 431 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ELAC2Q9BQ52 826 aaKnown RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 EBF4Q9BQW3 602 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ZPBPQ9BS86 351 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 DDA1Q9BW61 102 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 SORBS1Q9BX66 1292 aaKnown RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ZNF717Q9BY31 904 aaPredicted RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ASPSCR1Q9BZE9 553 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ACTR5Q9H9F9 607 aaPredicted RBP16.69■□□□□ 0.26
CHMP3-207ENST00000485465 ANKHQ9HCJ1 492 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 LHX9Q9NQ69 397 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 SIRT5Q9NXA8 310 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 SRPK3Q9UPE1 567 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 PCDHGA8Q9Y5G5 932 aa16.69■□□□□ 0.26
CHMP3-207ENST00000485465 CFAP54Q96N23 3096 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 A0A0G2JND7 137 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 DSCR3O14972 297 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 FOXS1O43638 330 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 HBQ1P09105 142 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 IL1RNP18510 177 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 SSR2P43308 183 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 TSFMP43897 325 aaKnown RBP16.68■□□□□ 0.26
CHMP3-207ENST00000485465 ACSM2AQ08AH3 577 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 SMU1Q2TAY7 513 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 DEFB134Q4QY38 66 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 RFTN2Q52LD8 501 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-207ENST00000485465 ACSM2BQ68CK6 577 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 NXNQ6DKJ4 435 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 RHBDD2Q6NTF9 364 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 ZNF793Q6ZN11 406 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 ACAD11Q709F0 780 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 PRSS41Q7RTY9 318 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 PDSS2Q86YH6 399 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 C11orf24Q96F05 449 aaPredicted RBP16.68■□□□□ 0.26
CHMP3-207ENST00000485465 TEFMQ96QE5 360 aaKnown RBP16.68■□□□□ 0.26
CHMP3-207ENST00000485465 OR52B2Q96RD2 323 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 TMEM120AQ9BXJ8 343 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 SLC7A5P2Q9GIP4 190 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 ROGDIQ9GZN7 287 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 RABEP2Q9H5N1 569 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 POLR1BQ9H9Y6 1135 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 DHCR7Q9UBM7 475 aaKnown RBP16.68■□□□□ 0.26
CHMP3-207ENST00000485465 ADAM29Q9UKF5 820 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 NAALAD2Q9Y3Q0 740 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 PCDHGA3Q9Y5H0 932 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 B3GALT1Q9Y5Z6 326 aa16.68■□□□□ 0.26
CHMP3-207ENST00000485465 A0A088AWK7 358 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 A0A0A6YYC8 382 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 C9orf172C9J069 976 aa16.67■□□□□ 0.26
CHMP3-207ENST00000485465 I3L1I5 382 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 GALR3O60755 368 aaPredicted RBP16.67■□□□□ 0.26
CHMP3-207ENST00000485465 EEDO75530 441 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms