RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 MAT1AQ00266 395 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 PCDH1Q08174 1060 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 C19orf57Q0VDD7 668 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 AIMP2Q13155 320 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 ATP1A4Q13733 1029 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 RCN2Q14257 317 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 SYT16Q17RD7 645 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 CCDC153Q494R4 210 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 MINDY4Q4G0A6 757 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 LACTB2Q53H82 288 aaPredicted RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 DCAF10Q5QP82 559 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 TTC19Q6DKK2 380 aaPredicted RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 CHSY3Q70JA7 882 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 PRSS41Q7RTY9 318 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 GOLGA7Q7Z5G4 137 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 CYP4X1Q8N118 509 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 ARHGEF39Q8N4T4 335 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 DTWD1Q8N5C7 304 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 AMER3Q8N944 861 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 CCDC63Q8NA47 563 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 OR2L5Q8NG80 312 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 EPS8L3Q8TE67 593 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 UTP15Q8TED0 518 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 CREB3L4Q8TEY5 395 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 AENQ8WTP8 325 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 CCDC126Q96EE4 140 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 PEX11GQ96HA9 241 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 OR1F2PQ96R84 312 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 SLC25A23Q9BV35 468 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 REXO4Q9GZR2 422 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 RHBGQ9H310 441 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 NOL11Q9H8H0 719 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 GPR83Q9NYM4 423 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 TMEM216Q9P0N5 145 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 HCN3Q9P1Z3 774 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 MID2Q9UJV3 735 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 STK38LQ9Y2H1 464 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 MRPS2Q9Y399 296 aaKnown RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 HEMK1Q9Y5R4 338 aaPredicted RBP7.4□□□□□ -1.22
MACF1-220ENST00000485063 SPACA6W5XKT8 324 aa7.4□□□□□ -1.22
MACF1-220ENST00000485063 SEC16AO15027 2179 aa7.4□□□□□ -1.23
MACF1-220ENST00000485063 NSG1A0A0A6YYJ2 146 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 A0A1W2PPM1 405 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 LRIT2A6NDA9 550 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ZNF860A6NHJ4 632 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 A6NL46 340 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 A8MT66 165 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 COPEO14579 308 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 FFAR3O14843 346 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 GPR42O15529 346 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 B3GALT2O43825 422 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ALOX12BO75342 701 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 WFS1O76024 890 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 SUPT7LO94864 414 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 SIX3O95343 332 aaPredicted RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 OTCP00480 354 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 HPP00738 406 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ALPPP05187 535 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 C8orf89P0DMQ9 161 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 RNH1P13489 461 aaKnown RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 ICAM2P13598 275 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 KRT4P19013 534 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 EPORP19235 508 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ATP5F1P24539 256 aaPredicted RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 ITGA3P26006 1051 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 PIK3CBP42338 1070 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 PGDP52209 483 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 RAP1GDS1P52306 607 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 PLA2G16P53816 162 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 MTTPP55157 894 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 NAA20P61599 178 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 BTN3A2P78410 334 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 CHAF1BQ13112 559 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 DDX39BQ13838 428 aaKnown RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 E2F2Q14209 437 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 CPSF6Q16630 551 aaKnown RBP eCLIP7.39□□□□□ -1.23
MACF1-220ENST00000485063 AP5B1Q2VPB7 878 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 TMEM35AQ53FP2 167 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 C10orf62Q5T681 223 aaPredicted RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 FAAH2Q6GMR7 532 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 TCTN3Q6NUS6 607 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 PCSK4Q6UW60 755 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 PPP1R32Q7Z5V6 425 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 MILR1Q7Z6M3 343 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 CROCCP2Q86T23 111 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 HPS6Q86YV9 775 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 LAS2Q8IYD9 372 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 GALNT16Q8N428 558 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 AFAP1L2Q8N4X5 818 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 EXD3Q8N9H8 876 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ARMC2Q8NEN0 867 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 OR7G3Q8NG95 312 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 ADAMTS18Q8TE60 1221 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 TBC1D20Q96BZ9 403 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 MS4A6EQ96DS6 147 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 CMTM7Q96FZ5 175 aa7.39□□□□□ -1.23
MACF1-220ENST00000485063 BBC3Q96PG8 261 aaPredicted RBP7.39□□□□□ -1.23
MACF1-220ENST00000485063 KCNC2Q96PR1 638 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms