RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 RAD51AP1Q96B01 352 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 PYCR2Q96C36 320 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 REPS1Q96D71 796 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 CXorf40BQ96DE9 158 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SPDL1Q96EA4 605 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 LIN37Q96GY3 246 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 AHCYL2Q96HN2 611 aaKnown RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 C12orf66Q96MD2 445 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 SLC46A1Q96NT5 459 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 ANKRD27Q96NW4 1050 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 TGM7Q96PF1 710 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 INSM2Q96T92 566 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 C1orf50Q9BV19 199 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 VCX3BQ9H321 246 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 LRTM1Q9HBL6 345 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 C1orf109Q9NX04 203 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 GPRC5BQ9NZH0 403 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 STOX2Q9P2F5 926 aaPredicted RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 STX18Q9P2W9 335 aaKnown RBP6.65□□□□□ -1.35
BRCA1-216ENST00000484087 GIMAP2Q9UG22 337 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 POMPQ9Y244 141 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 TMED5Q9Y3A6 229 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 KCNE2Q9Y6J6 123 aa6.65□□□□□ -1.35
BRCA1-216ENST00000484087 AHCTF1Q8WYP5 2266 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 C15orf38-AP3S2A0A0A6YYH1 394 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 EFCAB7A8K855 629 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 CDRT15L2A8MXV6 281 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 DUX1O43812 170 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KDM1AO60341 852 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KCNJ13O60928 360 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 SEC22BO75396 215 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KRT36O76013 467 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 RSL1D1O76021 490 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 MYO1DO94832 1006 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 ANP32DO95626 131 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 BAG2O95816 211 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 SLC35G4P0C7Q5 338 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PRPS2P11908 318 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PNLIPP16233 465 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 WT1P19544 449 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 IDSP22304 550 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 RBMS1P29558 406 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 HSD17B2P37059 387 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 BDKRB1P46663 353 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PCBP4P57723 403 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 RPL38P63173 70 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 CXADRP78310 365 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PHEXP78562 749 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 TLE3Q04726 772 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 CSTF3Q12996 717 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 CHIT1Q13231 466 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 CLN3Q13286 438 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 NFYCQ13952 458 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 RCAN2Q14206 197 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 FLOT2Q14254 428 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KCNAB1Q14722 419 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 RPE65Q16518 533 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 HIST2H2ACQ16777 129 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 SPATS1Q496A3 300 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 VPS26BQ4G0F5 336 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 XKR6Q5GH73 641 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PIGGQ5H8A4 983 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PAGE2BQ5JRK9 111 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 C10orf62Q5T681 223 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 IL23RQ5VWK5 629 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 FRG2Q64ET8 278 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 HIST2H2AA3Q6FI13 130 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 IRGCQ6NXR0 463 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 TMEM26Q6ZUK4 368 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 ARPINQ7Z6K5 226 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 RASGRP3Q8IV61 690 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 FUNDC1Q8IVP5 155 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 DCUN1D3Q8IWE4 304 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PHC3Q8NDX5 983 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 OR6C4Q8NGE1 309 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 OR9A1PQ8NGU1 263 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 OR2T11Q8NH01 316 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 OR56A3Q8NH54 315 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 OR10G6Q8NH81 332 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 SNIP1Q8TAD8 396 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KCNE4Q8WWG9 221 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 CMTM7Q96FZ5 175 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 METTL2AQ96IZ6 378 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 TMEM74Q96NL1 305 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 BBC3Q96PG8 261 aaPredicted RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 FRG2BQ96QU4 278 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PKP4Q99569 1192 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 DPY30Q9C005 99 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 KLHL25Q9H0H3 589 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 XKR8Q9H6D3 395 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 NMRK1Q9NWW6 199 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 SUCOQ9UBS9 1254 aaKnown RBP6.64□□□□□ -1.35
BRCA1-216ENST00000484087 DKK4Q9UBT3 224 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 EGFL7Q9UHF1 273 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 ACSL5Q9ULC5 683 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 PLAGL1Q9UM63 463 aa6.64□□□□□ -1.35
BRCA1-216ENST00000484087 ASF1AQ9Y294 204 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms