RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, human

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM54-206	ENST00000482771	SAGE2P	A6NJ88	616 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	NPIPA2	E9PIF3	369 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	NPIPA3	F8WFD2	350 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	NDUFS4	O43181	175 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	KLK8	O60259	260 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	CEP104	O60308	925 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	HAUS5	O94927	633 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	KLK2	P20151	261 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	HNF4A	P41235	474 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	CCR8	P51685	355 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	ZNF75D	P51815	510 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	PPIA	P62937	165 aa	Known RBP	11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	PWP1	Q13610	501 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	SIX1	Q15475	284 aa	Predicted RBP	11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	PAOX	Q6QHF9	649 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	LCTL	Q6UWM7	567 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	QSOX2	Q6ZRP7	698 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	PALM2	Q8IXS6	379 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	CYP4Z2P	Q8N1L4	340 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	ARMC10	Q8N2F6	343 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	OR5M9	Q8NGP3	310 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	OR5M3	Q8NGP4	307 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	CD200R1	Q8TD46	325 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	EEF1AKMT1	Q8WVE0	214 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	BAG1	Q99933	345 aa	Predicted RBP	11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	DESI2	Q9BSY9	194 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	CXXC4	Q9H2H0	198 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	LIME1	Q9H400	295 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	GSX1	Q9H4S2	264 aa	Predicted RBP	11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	PARVB	Q9HBI1	364 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	SLC24A3	Q9HC58	644 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	NECTIN3	Q9NQS3	549 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	ZFAT	Q9P243	1243 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	FBXW2	Q9UKT8	454 aa		11.96	□□□□□ -0.49
TMEM54-206	ENST00000482771	TRBV11-1	A0A0K0K1C0	115 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	FAM237B	A0A1B0GVD1	139 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	TCRBV16S1A1N1	A0A5B0	115 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	ITGA10	O75578	1167 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	ZNF888	P0CJ79	500 aa	Predicted RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	TPSB2	P20231	275 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	CCND1	P24385	295 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	CLCN2	P51788	898 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	DLX5	P56178	289 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	RAB8A	P61006	207 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	PPP2R2A	P63151	447 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	SKP1	P63208	163 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	SARNP	P82979	210 aa	Known RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	FOLH1	Q04609	750 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	TRIP13	Q15645	432 aa	Predicted RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	TPSAB1	Q15661	275 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	NIPAL1	Q6NVV3	410 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	DRICH1	Q6PGQ1	229 aa	Predicted RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	CAND1	Q86VP6	1230 aa	Known RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	TXLNB	Q8N3L3	684 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	RNF10	Q8N5U6	811 aa	Known RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	ARMC2	Q8NEN0	867 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	ABHD11	Q8NFV4	315 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	OR4K1	Q8NGD4	311 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	UTP15	Q8TED0	518 aa	Known RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	ZNF669	Q96BR6	464 aa	Predicted RBP	11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	PYCR2	Q96C36	320 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	SNF8	Q96H20	258 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	HAUS8	Q9BT25	410 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	SGPP1	Q9BX95	441 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	TIMMDC1	Q9NPL8	285 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	PRDM9	Q9NQV7	894 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	PNPLA3	Q9NST1	481 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	DEPP	Q9NTK1	212 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	KCMF1	Q9P0J7	381 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	SAMD15	Q9P1V8	674 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	ERVK-11	Q9UQG0	969 aa		11.95	□□□□□ -0.5
TMEM54-206	ENST00000482771	IGKV3D-11	A0A0A0MRZ8	115 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	PINLYP	A6NC86	204 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	SDR42E2	A6NKP2	422 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	FAM166B	A8MTA8	275 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	PSMD12	O00232	456 aa	Predicted RBP	11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	SLC16A5	O15375	505 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	CTAG2	O75638	210 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	C8G	P07360	202 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	HIST1H2AG	P0C0S8	130 aa	Predicted RBP	11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	RNH1	P13489	461 aa	Known RBP	11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	HIST1H2AD	P20671	130 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	PLGLB1	Q02325	96 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	RGS1	Q08116	209 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	CEBPE	Q15744	281 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	CATSPERE	Q5SY80	951 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	ZNF585A	Q6P3V2	769 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	C16orf47	Q6ZP98	133 aa	Predicted RBP	11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	KIAA0408	Q6ZU52	694 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	ABHD13	Q7L211	337 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	TBC1D19	Q8N5T2	526 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	APCDD1L	Q8NCL9	501 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	B3GNT7	Q8NFL0	401 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	NINJ1	Q92982	152 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	HIST1H2AH	Q96KK5	128 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	HIST1H2AJ	Q99878	128 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	H2AFJ	Q9BTM1	129 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	SARG	Q9BW04	601 aa		11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	POLDIP3	Q9BY77	421 aa	Known RBP	11.94	□□□□□ -0.5
TMEM54-206	ENST00000482771	KLHL31	Q9H511	634 aa		11.94	□□□□□ -0.5

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