RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FER1L5A0AVI2 2057 aa19.79■□□□□ 0.76
SEC13-217ENST00000482647 ZNF860A6NHJ4 632 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 ARGFXA6NJG6 315 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 ERI3O43414 337 aaKnown RBP19.78■□□□□ 0.76
SEC13-217ENST00000482647 PLIN3O60664 434 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 SUPT7LO94864 414 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 OTCP00480 354 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 HEXBP07686 556 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 PIK3CBP42338 1070 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 XCR1P46094 333 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 EMP2P54851 167 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 RRADP55042 308 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 CDH13P55290 713 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 BTN3A2P78410 334 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 PHEXP78562 749 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 ATP1A4Q13733 1029 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 ADPRMQ3LIE5 342 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 TMEM35AQ53FP2 167 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 ZNF678Q5SXM1 525 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 TRIM40Q6P9F5 258 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 ZYG11AQ6WRX3 759 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 CHSY3Q70JA7 882 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 MED25Q71SY5 747 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 MILR1Q7Z6M3 343 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 CROCCP2Q86T23 111 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 APLFQ8IW19 511 aaPredicted RBP19.78■□□□□ 0.76
SEC13-217ENST00000482647 TMEM151BQ8IW70 566 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 TMEM102Q8N9M5 508 aaPredicted RBP19.78■□□□□ 0.76
SEC13-217ENST00000482647 BANPQ8N9N5 519 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 CCDC63Q8NA47 563 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 SRFBP1Q8NEF9 429 aaKnown RBP19.78■□□□□ 0.76
SEC13-217ENST00000482647 OR2L5Q8NG80 312 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 HUS1BQ8NHY5 278 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 CMTM7Q96FZ5 175 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 CDK15Q96Q40 435 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 F2RL3Q96RI0 385 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 SMC6Q96SB8 1091 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 AICDAQ9GZX7 198 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 MKS1Q9NXB0 559 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 P4HTMQ9NXG6 502 aa19.78■□□□□ 0.76
SEC13-217ENST00000482647 IDSB3KWA1 339 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 G3V2L1 256 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 RGS16O15492 202 aaPredicted RBP19.77■□□□□ 0.76
SEC13-217ENST00000482647 CHST10O43529 356 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 TBX6O95947 436 aaPredicted RBP19.77■□□□□ 0.76
SEC13-217ENST00000482647 B3GALT4O96024 378 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 FAM87AP0C7U9 286 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 SFTPCP11686 197 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 CPA3P15088 417 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 PLA2G16P53816 162 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 CLCQ05315 142 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 DDX39BQ13838 428 aaKnown RBP19.77■□□□□ 0.76
SEC13-217ENST00000482647 ZRSR2Q15696 482 aaKnown RBP19.77■□□□□ 0.76
SEC13-217ENST00000482647 UNC50Q53HI1 259 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 PCSK4Q6UW60 755 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 OR5T3Q8NGG3 340 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 L3HYPDHQ96EM0 354 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 APOPT1Q96IL0 206 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 FER1L6-AS2Q96M78 137 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 TMEM237Q96Q45 408 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 OR1F2PQ96R84 312 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 MS4A8Q9BY19 250 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 ING2Q9H160 280 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 ACSS2Q9NR19 701 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 MID2Q9UJV3 735 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 RALYQ9UKM9 306 aaKnown RBP19.77■□□□□ 0.76
SEC13-217ENST00000482647 MKL2Q9ULH7 1088 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 PLLPQ9Y342 182 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 HS3ST3B1Q9Y662 390 aa19.77■□□□□ 0.76
SEC13-217ENST00000482647 CACNA1GO43497 2377 aa19.77■□□□□ 0.75
SEC13-217ENST00000482647 PIEZO2Q9H5I5 2752 aa19.77■□□□□ 0.75
SEC13-217ENST00000482647 PCDH17O14917 1159 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 PTX3P26022 381 aaPredicted RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 OLR1P78380 273 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 TRAF3Q13114 568 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 MINDY4Q4G0A6 757 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 CEP85LQ5SZL2 805 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 C10orf62Q5T681 223 aaPredicted RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 MFSD4BQ5TF39 518 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 TTC19Q6DKK2 380 aaPredicted RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 ABHD17CQ6PCB6 329 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 RPS27LQ71UM5 84 aaKnown RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 OR4F6Q8NGB9 312 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 TRPC4APQ8TEL6 797 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 PEX11GQ96HA9 241 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 ZIM3Q96PE6 472 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 KCNC2Q96PR1 638 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 MTERF1Q99551 399 aaKnown RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 NPLQ9BXD5 320 aaPredicted RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 ROGDIQ9GZN7 287 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 ADNPQ9H2P0 1102 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 RRAGDQ9NQL2 400 aaPredicted RBP19.76■□□□□ 0.75
SEC13-217ENST00000482647 SENP1Q9P0U3 644 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 STK38LQ9Y2H1 464 aa19.76■□□□□ 0.75
SEC13-217ENST00000482647 C4orf51C9J302 202 aa19.75■□□□□ 0.75
SEC13-217ENST00000482647 AGPSO00116 658 aa19.75■□□□□ 0.75
SEC13-217ENST00000482647 DNAJB6O75190 326 aa19.75■□□□□ 0.75
SEC13-217ENST00000482647 MLYCDO95822 493 aa19.75■□□□□ 0.75
SEC13-217ENST00000482647 TGFB1P01137 390 aa19.75■□□□□ 0.75
SEC13-217ENST00000482647 CYC1P08574 325 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 175 ms