RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ACADLP28330 430 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 NDUFS1P28331 727 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 HOXD9P28356 352 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 OXTRP30559 389 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 AGTR2P50052 363 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SLC7A2P52569 658 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 THOP1P52888 689 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 DAOAP59103 153 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 TAS2R50P59544 299 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 RPL23AP62750 156 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 RPS15P62841 145 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 GOLGA8FQ08AF8 430 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 DMWDQ09019 674 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 CALCOCO2Q13137 446 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 TNK1Q13470 666 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 RCAN2Q14206 197 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 PTPRCAPQ14761 206 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 HSDL1Q3SXM5 330 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SPOUT1Q5T280 376 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 SNRNP48Q6IEG0 339 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 GJB7Q6PEY0 223 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 PRSS55Q6UWB4 352 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 KYAT3Q6YP21 454 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 SLC39A5Q6ZMH5 540 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 AKAP14Q86UN6 197 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 TDRPQ86YL5 185 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 FOXP4Q8IVH2 680 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 ZNF248Q8NDW4 579 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 OR4A15Q8NGL6 344 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 OR13F1Q8NGS4 319 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 GRHL3Q8TE85 626 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 TRPC4APQ8TEL6 797 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 C2CD4CQ8TF44 421 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ORAI1Q96D31 301 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 LINGO1Q96FE5 620 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 OTUB1Q96FW1 271 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 LRRC3BQ96PB8 259 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 GPA33Q99795 319 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SELENOSQ9BQE4 189 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 C1QTNF5Q9BXJ0 243 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ROPN1BQ9BZX4 212 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 SPATC1LQ9H0A9 340 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 TKTL2Q9H0I9 626 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 WWP1Q9H0M0 922 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 OPN3Q9H1Y3 402 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 OR2AG1Q9H205 316 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 GAL3ST2Q9H3Q3 398 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 ATP13A3Q9H7F0 1226 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 PIH1D3Q9NQM4 214 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 ASAH2Q9NR71 780 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 PNO1Q9NRX1 252 aaKnown RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 ERRFI1Q9UJM3 462 aaPredicted RBP3.92□□□□□ -1.78
VPS41-212ENST00000482217 ZNF229Q9UJW7 825 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 RNF150Q9ULK6 438 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SCML1Q9UN30 329 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 PCDHA12Q9UN75 941 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 GPR132Q9UNW8 380 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 LRRC42Q9Y546 428 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 MAU2Q9Y6X3 613 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SPATA31A6Q5VVP1 1343 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 SALL1Q9NSC2 1324 aa3.92□□□□□ -1.78
VPS41-212ENST00000482217 NINLQ9Y2I6 1382 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 FEZF1A0PJY2 475 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TMEM89A2RUT3 159 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FAM90A10PA6NDY2 464 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CD8B2A6NJW9 211 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TMEM210A6NLX4 147 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 WWP2O00308 870 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 PRYO14603 147 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 MDM4O15151 490 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 PPIP5K2O43314 1243 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SCN2BO60939 215 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 ATP9AO75110 1047 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CREG1O75629 220 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 RSL1D1O76021 490 aaKnown RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 UFL1O94874 794 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SEMA3DO95025 777 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CBX6O95503 412 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 IGLV2-14P01704 120 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 HEXAP06865 529 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FCGR2AP12318 317 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 NQO2P16083 231 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 HOXB8P17481 243 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 TPSB2P20231 275 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 BMP5P22003 454 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 PRPH2P23942 346 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 SLC6A6P31641 620 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FCGR2BP31994 310 aaPredicted RBP3.91□□□□□ -1.78
VPS41-212ENST00000482217 CDAP32320 146 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 CD80P33681 288 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 NAMPTP43490 491 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 MNAT1P51948 309 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 LRRC63Q05C16 580 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FOXM1Q08050 763 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 FADDQ13158 208 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 MADCAM1Q13477 382 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TGFBIQ15582 683 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 TPSAB1Q15661 275 aa3.91□□□□□ -1.78
VPS41-212ENST00000482217 NAB2Q15742 525 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms