RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 CRCPO75575 148 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SELEP16581 610 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 TYMPP19971 482 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 CASP3P42574 277 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SERPINH1P50454 418 aaKnown RBP4.83□□□□□ -1.64
SF3B1-210ENST00000482158 PMP22Q01453 160 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SGCBQ16585 318 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 FUT11Q495W5 492 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 AARDQ4LEZ3 155 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 C14orf177Q52M58 125 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SPANXN4Q5MJ08 99 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 CES4AQ5XG92 561 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SLC27A4Q6P1M0 643 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 C17orf107Q6ZR85 190 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 KRTAP7-1Q8IUC3 87 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 DND1Q8IYX4 353 aaKnown RBP4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SLC22A15Q8IZD6 547 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SFRP1Q8N474 314 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 CARNMT1Q8N4J0 409 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 OR4D10Q8NGI6 311 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 C11orf45Q8TAV5 145 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 POM121L2Q96KW2 1035 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 USP28Q96RU2 1077 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 RSPH9Q9H1X1 276 aaPredicted RBP4.83□□□□□ -1.64
SF3B1-210ENST00000482158 SPG21Q9NZD8 308 aa4.83□□□□□ -1.64
SF3B1-210ENST00000482158 NKX6-3A6NJ46 265 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 LMO7DNF2Z398 122 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 RTN2O75298 545 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 LETM1O95202 739 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 PRKACGP22612 351 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 GJB2P29033 226 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 TSFMP43897 325 aaKnown RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 GPR50Q13585 617 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 LASP1Q14847 261 aaKnown RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 WLSQ5T9L3 541 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 KCTD11Q693B1 232 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 TCEAL6Q6IPX3 200 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 MACC1Q6ZN28 852 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 FRRS1Q6ZNA5 592 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 LAX1Q8IWV1 398 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 UNC45BQ8IWX7 931 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 NAT8LQ8N9F0 302 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 RNASE8Q8TDE3 154 aaKnown RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 SEPT8Q92599 483 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 KRT35Q92764 455 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 SLC35C1Q96A29 364 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 CNRIP1Q96F85 164 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 NSMCE3Q96MG7 304 aa4.82□□□□□ -1.64
SF3B1-210ENST00000482158 OPRPNQ99935 248 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 MTHFD2LQ9H903 347 aaPredicted RBP4.82□□□□□ -1.64
SF3B1-210ENST00000482158 hCG_38984A0A1B0GV85 526 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 C5orf51A6NDU8 294 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 M0R296 226 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 C4BPBP20851 252 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 CLK1P49759 484 aaKnown RBP4.81□□□□□ -1.64
SF3B1-210ENST00000482158 GSCP56915 257 aaPredicted RBP4.81□□□□□ -1.64
SF3B1-210ENST00000482158 KIAA1024LP59773 190 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 HILS1P60008 231 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 CYCSP99999 105 aaKnown RBP4.81□□□□□ -1.64
SF3B1-210ENST00000482158 SLC34A1Q06495 639 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 MAPK11Q15759 364 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 CEP85LQ5SZL2 805 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 PLPP4Q5VZY2 271 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 BSPRYQ5W0U4 402 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 KIF6Q6ZMV9 814 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 PRSS42Q7Z5A4 293 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 CCDC185Q8N715 623 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 FAM46BQ96A09 425 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 BPIFA2Q96DR5 249 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 CABS1Q96KC9 395 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 PCDHB18PQ96TA0 734 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 ZDHHC6Q9H6R6 413 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 MED20Q9H944 212 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 MTRRQ9UBK8 725 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 STX8Q9UNK0 236 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 ZNF510Q9Y2H8 683 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 WIPI2Q9Y4P8 454 aa4.81□□□□□ -1.64
SF3B1-210ENST00000482158 CCDC162PA2VCL2 907 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 FAM149AA5PLN7 773 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 RNF103O00237 685 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 P2RX6O15547 441 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 GRAP2O75791 330 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ODC1P11926 461 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ATP6V1B1P15313 513 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 CTNNA2P26232 953 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 OR1D2P34982 312 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 CTNNB1P35222 781 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 FEN1P39748 380 aaKnown RBP4.8□□□□□ -1.64
SF3B1-210ENST00000482158 IRX1P78414 480 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-210ENST00000482158 SLC3A1Q07837 685 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ACTN3Q08043 901 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-210ENST00000482158 CNTN1Q12860 1018 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 CEACAM7Q14002 265 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 RPS6KA1Q15418 735 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 FAM189A2Q15884 450 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ACKR1Q16570 336 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ODF2Q5BJF6 829 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 ZNF776Q68DI1 518 aaPredicted RBP4.8□□□□□ -1.64
SF3B1-210ENST00000482158 Q6ZVQ6 151 aa4.8□□□□□ -1.64
SF3B1-210ENST00000482158 CHMP1BQ7LBR1 199 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms