RNA–Protein interactions for RNA: ENST00000480907.5

NUB1-208, Transcript of negative regulator of ubiquitin like proteins 1, human

TSL 5

Gene NUB1, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUB1-208	ENST00000480907	TUBB1	Q9H4B7	451 aa		4.37	□□□□□ -1.71
NUB1-208	ENST00000480907	RPF1	Q9H9Y2	349 aa	Known RBP	4.37	□□□□□ -1.71
NUB1-208	ENST00000480907	DNAJB9	Q9UBS3	223 aa		4.37	□□□□□ -1.71
NUB1-208	ENST00000480907	YDJC	A8MPS7	323 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	SRRM5	B3KS81	715 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	ZNF732	B4DXR9	585 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	TRAFD1	O14545	582 aa	Predicted RBP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	IFIT3	O14879	490 aa	Known RBP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	SIGLEC5	O15389	551 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	RLN1	P04808	185 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	CAST	P20810	708 aa	Known RBP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	SRD5A2	P31213	254 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	FEN1	P39748	380 aa	Known RBP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	CLCN4	P51793	760 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	SLC8A3	P57103	927 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	ERVK-16	P61578	105 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	KIAA0141	Q14154	515 aa	Predicted RBP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	MS4A18	Q3C1V0	323 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	ARMC3	Q5W041	872 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	MACC1	Q6ZN28	852 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	SLC47A2	Q86VL8	602 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	TICAM2	Q86XR7	235 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	CCDC185	Q8N715	623 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	NPRL2	Q8WTW4	380 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	RASL10A	Q92737	203 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	FOXN4	Q96NZ1	517 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	THUMPD3	Q9BV44	507 aa	Known RBP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	KLK11	Q9UBX7	282 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	ITGA11	Q9UKX5	1188 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	NCKAP1	Q9Y2A7	1128 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	PCDHGA1	Q9Y5H4	931 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	RNF123	Q5XPI4	1314 aa		4.36	□□□□□ -1.71
NUB1-208	ENST00000480907	IGLV4-3	A0A075B6K6	122 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	ILVBL	A1L0T0	632 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	ANKDD1B	A6NHY2	528 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	TNFSF12	O43508	249 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	MTRF1	O75570	445 aa	Known RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	POP4	O95707	220 aa	Known RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	GLUL	P15104	373 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	GIF	P27352	417 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	PIK3R1	P27986	724 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	PRELP	P51888	382 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	ABCE1	P61221	599 aa	Known RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	FKBP3	Q00688	224 aa	Known RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	SCN1B	Q07699	218 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	PPA1	Q15181	289 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	UPP1	Q16831	310 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	FAM133B	Q5BKY9	247 aa	Known RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	SPINK14	Q6IE38	97 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	NHLRC1	Q6VVB1	395 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907		Q6ZVQ6	151 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	GALNTL5	Q7Z4T8	443 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	ANKRD46	Q86W74	232 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	PHC2	Q8IXK0	858 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	LYG1	Q8N1E2	194 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	NHLRC2	Q8NBF2	726 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	PCDHB18P	Q96TA0	734 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	CITED2	Q99967	270 aa	Predicted RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	DCTN5	Q9BTE1	182 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	DPEP2	Q9H4A9	486 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	GPN1	Q9HCN4	374 aa	Predicted RBP	4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	MRGBP	Q9NV56	204 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907	SMAD5-AS1	Q9Y6J3	95 aa		4.35	□□□□□ -1.71
NUB1-208	ENST00000480907		A8MU76	341 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	CTDSPL	O15194	276 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	HPR	P00739	348 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	CTNNA2	P26232	953 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	CAPG	P40121	348 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	PGF	P49763	221 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	RPP38	P78345	283 aa	Known RBP	4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	BFSP1	Q12934	665 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	KRT71	Q3SY84	523 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	TCEAL6	Q6IPX3	200 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	C4orf19	Q8IY42	314 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	ZNF597	Q96LX8	424 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	PARK7	Q99497	189 aa	Known RBP	4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	ATG101	Q9BSB4	218 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	RAB11FIP5	Q9BXF6	653 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	LSG1	Q9H089	658 aa	Known RBP	4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	MRPL17	Q9NRX2	175 aa	Known RBP	4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	SLCO1C1	Q9NYB5	712 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	TMOD3	Q9NYL9	352 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	GPR132	Q9UNW8	380 aa		4.34	□□□□□ -1.71
NUB1-208	ENST00000480907	PFAS	O15067	1338 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	SERINC4	A6NH21	518 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	ACOD1	A6NK06	481 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	ARHGEF33	A8MVX0	844 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	KBTBD13	C9JR72	458 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	PC	P11498	1178 aa	Known RBP	4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	IL4R	P24394	825 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	OXTR	P30559	389 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	PKLR	P30613	574 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	NPBWR1	P48145	328 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	EVC	P57679	992 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	PTK6	Q13882	451 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	SCARB2	Q14108	478 aa		4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	MLF2	Q15773	248 aa	Predicted RBP	4.33	□□□□□ -1.72
NUB1-208	ENST00000480907	ZNF239	Q16600	458 aa	Known RBP	4.33	□□□□□ -1.72

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms