RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 RAD51DO75771 328 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 DPP6P42658 865 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 GSTM4Q03013 218 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 DSC3Q14574 896 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PSD4Q8NDX1 1056 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 TRMT61BQ9BVS5 477 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 GOLGA2P5Q9HBQ8 144 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 MTCL1Q9Y4B5 1905 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 AGAP5A6NIR3 686 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 PENKP01210 267 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SNHG28P0DPA3 235 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CSKP41240 450 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SLC3A1Q07837 685 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SMYD5Q6GMV2 418 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 DUS1LQ6P1R4 473 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CIR1Q86X95 450 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 CLIP4Q8N3C7 705 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 BBS10Q8TAM1 723 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 HDAC2Q92769 488 aaKnown RBP9.25□□□□□ -0.93
VEGFA-212ENST00000480614 SLC7A11Q9UPY5 501 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 LIPT1Q9Y234 373 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 NUP188Q5SRE5 1749 aa9.25□□□□□ -0.93
VEGFA-212ENST00000480614 EIF1AYO14602 144 aaKnown RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ALPIP09923 528 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 EIF1AXP47813 144 aaKnown RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF763Q0D2J5 394 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 SLC5A11Q8WWX8 675 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZDHHC12Q96GR4 267 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF641Q96N77 438 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 A8MUI8 341 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 PTGIRP43119 386 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 KCTD18Q6PI47 426 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TMED4Q7Z7H5 227 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TSPEARQ8WU66 669 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 NAA11Q9BSU3 229 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 PCP4L1A6NKN8 68 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 H0YAE9 185 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 EPOP01588 193 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 GJB1P08034 283 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF84P51523 738 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 OR6N1Q8NGY5 312 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 IL4I1Q96RQ9 567 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 MALT1Q9UDY8 824 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TMEM14AQ9Y6G1 99 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 CAPN5O15484 640 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 UQCRC2P22695 453 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 MALLQ13021 153 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 GNPDA2Q8TDQ7 276 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 FKBP10Q96AY3 582 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 DERL2Q9GZP9 239 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 RNF19AQ9NV58 838 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 CMAHPQ9Y471 501 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ARPC4-TTLL3A0A0A6YYG9 625 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 E2F3O00716 465 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 MT-ND2P03891 347 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 DNAJB13P59910 316 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 RIN1Q13671 783 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 SH3RF2Q8TEC5 729 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 LPIN3Q9BQK8 851 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TMED9Q9BVK6 235 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 DTLQ9NZJ0 730 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 VNN2O95498 520 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 CDKN1CP49918 316 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF773Q6PK81 442 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TNFRSF25Q93038 417 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 DNAJC5Q9H3Z4 198 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 NOTOA8MTQ0 251 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 J3QLW9 94 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 MANBAO00462 879 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 DIRAS3O95661 229 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF19P17023 458 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 CDK2P24941 298 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 WASP42768 502 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TLE2Q04725 743 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 MLC1Q15049 377 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 C7orf61Q8IZ16 206 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 NDRG1Q92597 394 aaKnown RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 PMM1Q92871 262 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TMEM41AQ96HV5 264 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 FBXL12Q9NXK8 326 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 FAM170BA6NMN3 283 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 DLGAP1O14490 977 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 S100A7P31151 101 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 RBMXP38159 391 aaKnown RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ACTA2P62736 377 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ACTG2P63267 376 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 HSD11B2P80365 405 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ZNF45Q02386 682 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ALDH16A1Q8IZ83 802 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 UBE2J2Q8N2K1 259 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 MAGED1Q9Y5V3 778 aaPredicted RBP9.24□□□□□ -0.93
VEGFA-212ENST00000480614 ABCC6O95255 1503 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 AOC2O75106 756 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 AOC1P19801 751 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 CLCNKAP51800 687 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 AADACL4Q5VUY2 407 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 SPRYD7Q5W111 196 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 PIGWQ7Z7B1 504 aa9.24□□□□□ -0.93
VEGFA-212ENST00000480614 TRIM43Q96BQ3 446 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms