RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 SLC13A3Q8WWT9 602 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 MTFMTQ96DP5 389 aaKnown RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 L3HYPDHQ96EM0 354 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 SH3GL2Q99962 352 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 NDC1Q9BTX1 674 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 EFCAB11Q9BUY7 163 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 GATA5Q9BWX5 397 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 C1QTNF3Q9BXJ4 246 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 GSTO2Q9H4Y5 243 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 CUTCQ9NTM9 273 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 KCND3Q9UK17 655 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 ZNF490Q9ULM2 529 aaPredicted RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 RUVBL1Q9Y265 456 aaKnown RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 MRPS2Q9Y399 296 aaKnown RBP8.61□□□□□ -1.03
VCP-206ENST00000480327 MAP4K5Q9Y4K4 846 aa8.61□□□□□ -1.03
VCP-206ENST00000480327 SCN3AQ9NY46 2000 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 KCNE1BA0A087WTH5 132 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ANKDD1BA6NHY2 528 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 C21orf140B9A014 251 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 TM9SF1O15321 606 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 PRPF4O43172 522 aaKnown RBP eCLIP8.6□□□□□ -1.03
VCP-206ENST00000480327 TRIM13O60858 407 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CPNE3O75131 537 aaKnown RBP8.6□□□□□ -1.03
VCP-206ENST00000480327 CEACAM4O75871 244 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 WFS1O76024 890 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ZWINTO95229 277 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 MED26O95402 600 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CAPN1P07384 714 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 BPGMP07738 259 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 MSL3P1P0C860 447 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 NEFHP12036 1026 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 PTPN4P29074 926 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CASP2P42575 452 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ETV4P43268 484 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 SERPINB4P48594 390 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 NEK2P51955 445 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 DNAJB13P59910 316 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 RELAQ04206 551 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 TRAF3Q13114 568 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 GPS2Q13227 327 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 LAPTM5Q13571 262 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 GRM7Q14831 915 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ZRSR2Q15696 482 aaKnown RBP8.6□□□□□ -1.03
VCP-206ENST00000480327 TBCCQ15814 346 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 SGO1Q5FBB7 561 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 PAGE2BQ5JRK9 111 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 HHATQ5VTY9 493 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 TTC19Q6DKK2 380 aaPredicted RBP8.6□□□□□ -1.03
VCP-206ENST00000480327 GRHL2Q6ISB3 625 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 METTL2BQ6P1Q9 378 aaKnown RBP8.6□□□□□ -1.03
VCP-206ENST00000480327 MED27Q6P2C8 311 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 TLDC1Q6P9B6 456 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 SYVN1Q86TM6 617 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ATCAYQ86WG3 371 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 NUDCD3Q8IVD9 361 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 KCT2Q8NC54 265 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CAMKVQ8NCB2 501 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 GALNT11Q8NCW6 608 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 PPP1R14CQ8TAE6 165 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CPT1CQ8TCG5 803 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.6□□□□□ -1.03
VCP-206ENST00000480327 MR1Q95460 341 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 THAP11Q96EK4 314 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 WDR34Q96EX3 536 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ZNF285Q96NJ3 590 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 NLNQ9BYT8 704 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 DRC3Q9H069 523 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ACBD3Q9H3P7 528 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 EHD1Q9H4M9 534 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 KLHL31Q9H511 634 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 MID1IP1Q9NPA3 183 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 TXLNGQ9NUQ3 528 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 NKIRAS1Q9NYS0 192 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 ZFP69BQ9UJL9 534 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 AP1M2Q9Y6Q5 423 aa8.6□□□□□ -1.03
VCP-206ENST00000480327 CROCCQ5TZA2 2017 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TEP1Q99973 2627 aaKnown RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 A0A0A6YYC8 382 aaPredicted RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 A0A0G2JN53 185 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 FITM1A5D6W6 292 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 ARGFXA6NJG6 315 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TTLL8A6PVC2 850 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 I3L1I5 382 aaPredicted RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 UBFD1O14562 309 aaKnown RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 B3GALT4O96024 378 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 OTCP00480 354 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TGFB1P01137 390 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 SLC35G6P0C7Q6 338 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 AHRP35869 848 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 ARSFP54793 590 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
VCP-206ENST00000480327 ASPHQ12797 758 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 LCP2Q13094 533 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 CHI3L2Q15782 390 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 PRTGQ2VWP7 1150 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TOR1AIP1Q5JTV8 583 aa8.59□□□□□ -1.03
VCP-206ENST00000480327 TCHHL1Q5QJ38 904 aaPredicted RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms