RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 TCFL5Q9UL49 500 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 NAALAD2Q9Y3Q0 740 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 MAU2Q9Y6X3 613 aa18.72■□□□□ 0.59
LIME1-205ENST00000480139 A0A088AWK7 358 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 TMEM120BA0PK00 339 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 NPHS1O60500 1241 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 KLF7O75840 302 aaPredicted RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 SASH3O75995 380 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 OR4F21O95013 312 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 ZNF10P21506 573 aaPredicted RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 SERPINB5P36952 375 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 MC1RQ01726 317 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 ZNF33BQ06732 778 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 TGM3Q08188 693 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 GALNT1Q10472 559 aaPredicted RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 IFT88Q13099 833 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 COL9A2Q14055 689 aaPredicted RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 DEFB134Q4QY38 66 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 MLIPQ5VWP3 458 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 KHDRBS2Q5VWX1 349 aaKnown RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 TRIM40Q6P9F5 258 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 CHSY3Q70JA7 882 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 ZSCAN1Q8NBB4 408 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 OR6Y1Q8NGX8 325 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 STARD8Q92502 1023 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 ARL8AQ96BM9 186 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 MTERF1Q99551 399 aaKnown RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 TGIF2Q9GZN2 237 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 ELOVL6Q9H5J4 265 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 MKKSQ9NPJ1 570 aaPredicted RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 WDR70Q9NW82 654 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 ZNF282Q9UDV7 671 aaPredicted RBP18.71■□□□□ 0.59
LIME1-205ENST00000480139 SNX6Q9UNH7 406 aa18.71■□□□□ 0.59
LIME1-205ENST00000480139 VSTM2BA6NLU5 285 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 ZNF891A8MT65 544 aaPredicted RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 C4orf51C9J302 202 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 K7ENP7 123 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 UBFD1O14562 309 aaKnown RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 ERI3O43414 337 aaKnown RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 CREG1O75629 220 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 WT1P19544 449 aaPredicted RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 PTX3P26022 381 aaPredicted RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 TSFMP43897 325 aaKnown RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 RAB8AP61006 207 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 CUL3Q13618 768 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 DDX39BQ13838 428 aaKnown RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 SLC9A5Q14940 896 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 NKG7Q16617 165 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 DEPDC1Q5TB30 811 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 TTC19Q6DKK2 380 aaPredicted RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 ABHD17CQ6PCB6 329 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 INO80CQ6PI98 192 aaPredicted RBP18.7■□□□□ 0.58
LIME1-205ENST00000480139 HOMEZQ8IX15 550 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 GOLGA6L1Q8N7Z2 621 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 CDYL2Q8N8U2 506 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 OR2Y1Q8NGV0 311 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 FAR2Q96K12 515 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 KCNC2Q96PR1 638 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 CENPKQ9BS16 269 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 ROGDIQ9GZN7 287 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 ACBD3Q9H3P7 528 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 MID1IP1Q9NPA3 183 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 C14orf105Q9NVL8 296 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 CTSFQ9UBX1 484 aa18.7■□□□□ 0.58
LIME1-205ENST00000480139 PKD1L2Q7Z442 2459 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 MAGEB17A8MXT2 336 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 SGK494L7N484 410 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 FFAR3O14843 346 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 GPR42O15529 346 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 CNOT3O75175 753 aaKnown RBP18.69■□□□□ 0.58
LIME1-205ENST00000480139 RDH16O75452 317 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 TGFB1P01137 390 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 KRT6AP02538 564 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 KRT6BP04259 564 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 IL10P22301 178 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 KRT6CP48668 564 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 RPS13P62277 151 aaKnown RBP18.69■□□□□ 0.58
LIME1-205ENST00000480139 OCA2Q04671 838 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 VAC14Q08AM6 782 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 NUDCD3Q8IVD9 361 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 QRFPRQ96P65 431 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 F2RL3Q96RI0 385 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 SPSB2Q99619 263 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 TBCDQ9BTW9 1192 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 NPLQ9BXD5 320 aaPredicted RBP18.69■□□□□ 0.58
LIME1-205ENST00000480139 BRF2Q9HAW0 419 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 ZNF446Q9NWS9 450 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 TRPC4Q9UBN4 977 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 MRPS18BQ9Y676 258 aaKnown RBP18.69■□□□□ 0.58
LIME1-205ENST00000480139 SCN3AQ9NY46 2000 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 NUP210LQ5VU65 1888 aa18.69■□□□□ 0.58
LIME1-205ENST00000480139 PTPRQQ9UMZ3 2332 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 EPG5Q9HCE0 2579 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 HMGB1P1B2RPK0 211 aaPredicted RBP18.68■□□□□ 0.58
LIME1-205ENST00000480139 SEMA3DO95025 777 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 SCELO95171 688 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 FOLR3P41439 243 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 NEK2P51955 445 aa18.68■□□□□ 0.58
LIME1-205ENST00000480139 RPS18P62269 152 aaKnown RBP18.68■□□□□ 0.58
LIME1-205ENST00000480139 RCN2Q14257 317 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms