RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 RHDQ02161 417 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 TGM3Q08188 693 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ASPHQ12797 758 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 LCP2Q13094 533 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ERV3-1Q14264 604 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ZRSR2Q15696 482 aaKnown RBP10.26□□□□□ -0.77
ATG4B-219ENST00000479941 DEFB134Q4QY38 66 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 TMEM35AQ53FP2 167 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 TOR1AIP1Q5JTV8 583 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 LIPMQ5VYY2 423 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ADNP2Q6IQ32 1131 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 TRIM40Q6P9F5 258 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 RPS27LQ71UM5 84 aaKnown RBP10.26□□□□□ -0.77
ATG4B-219ENST00000479941 PDSS2Q86YH6 399 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 RAB43Q86YS6 212 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 CCNYL1Q8N7R7 359 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 OR2L5Q8NG80 312 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 OR4F6Q8NGB9 312 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 HUS1BQ8NHY5 278 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 WDR20Q8TBZ3 569 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ADAMTS17Q8TE56 1095 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 THAP4Q8WY91 577 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 MS4A6EQ96DS6 147 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 CMTM7Q96FZ5 175 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 PKNOX2Q96KN3 472 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 IP6K3Q96PC2 410 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF382Q96SR6 550 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 MS4A8Q9BY19 250 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 ROGDIQ9GZN7 287 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 KLHL31Q9H511 634 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 PSD3Q9NYI0 1048 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 CTSFQ9UBX1 484 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 TRPS1Q9UHF7 1281 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 PPT2Q9UMR5 302 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 PIEZO2Q9H5I5 2752 aa10.26□□□□□ -0.77
ATG4B-219ENST00000479941 H3BQF6 201 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 FOXE1O00358 373 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 PPP6CO00743 305 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 ERI3O43414 337 aaKnown RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 TRIM13O60858 407 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 RDH16O75452 317 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 IGHEP01854 428 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 PRKAR1AP10644 381 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 H2AFXP16104 143 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 TSPAN8P19075 237 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 PTX3P26022 381 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 ARFIP1P53367 373 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 PLA2G16P53816 162 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 NAGLUP54802 743 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 PKNOX1P55347 436 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 MAT1AQ00266 395 aaKnown RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 KLC1Q07866 573 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 IFT88Q13099 833 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 IL10RAQ13651 578 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 DDX39BQ13838 428 aaKnown RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 PCLAFQ15004 111 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 SYT16Q17RD7 645 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 VWA2Q5GFL6 755 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 CFAP157Q5JU67 520 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 DEPDC1Q5TB30 811 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 FRG2Q64ET8 278 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 TTC19Q6DKK2 380 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 ABHD17CQ6PCB6 329 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 FRMD7Q6ZUT3 714 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 C10orf107Q8IVU9 208 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 OR51Q1Q8NH59 317 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 SREK1Q8WXA9 508 aaKnown RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 KCNC2Q96PR1 638 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 FRG2BQ96QU4 278 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 OR1F2PQ96R84 312 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 MTERF1Q99551 399 aaKnown RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 CENPKQ9BS16 269 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 TBCDQ9BTW9 1192 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 NPLQ9BXD5 320 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 AICDAQ9GZX7 198 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 GSTO2Q9H4Y5 243 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 ELOVL6Q9H5J4 265 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 SOX17Q9H6I2 414 aaPredicted RBP10.25□□□□□ -0.77
ATG4B-219ENST00000479941 DMRT3Q9NQL9 472 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 SEMA3GQ9NS98 782 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 SLC17A7Q9P2U7 560 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 SNX6Q9UNH7 406 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 POLHQ9Y253 713 aa10.25□□□□□ -0.77
ATG4B-219ENST00000479941 FAM208BQ5VWN6 2430 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 SMG1Q96Q15 3661 aaKnown RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 A0A1B0GTL3 188 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ZNF860A6NHJ4 632 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 MAGEB17A8MXT2 336 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 C4orf51C9J302 202 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 PCDH17O14917 1159 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 TM9SF1O15321 606 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 OR4F21O95013 312 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 BMP10O95393 424 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ESRRBO95718 433 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 TGFB1P01137 390 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 ENO1P06733 434 aaKnown RBP10.24□□□□□ -0.77
ATG4B-219ENST00000479941 UMODP07911 640 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 CYC1P08574 325 aa10.24□□□□□ -0.77
ATG4B-219ENST00000479941 FURINP09958 794 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms