RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 AP2A2O94973 939 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TIA1P31483 386 aaKnown RBP eCLIP10.37□□□□□ -0.75
VPS52-217ENST00000478934 HNF4AP41235 474 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TAS2R50P59544 299 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ZNF846Q147U1 533 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 KIAA1614Q5VZ46 1190 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 NEK10Q6ZWH5 1172 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 RNF130Q86XS8 419 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 FAM9CQ8IZT9 166 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 YIPF6Q96EC8 236 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ZNF300Q96RE9 604 aaPredicted RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 NIPSNAP1Q9BPW8 284 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 BTBD2Q9BX70 525 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 RAD18Q9NS91 495 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TM7SF3Q9NS93 570 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SCN3BQ9NY72 215 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SPASTQ9UBP0 616 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 RNF6Q9Y252 685 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TPRKBQ9Y3C4 175 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 PCDHGA6Q9Y5G7 932 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 KCNE2Q9Y6J6 123 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 CKAP5Q14008 2032 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SERTM1A2A2V5 107 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 M0QX08 132 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 AGRPO00253 132 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 PTPN2P17706 415 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 NNMTP40261 264 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 EIF2B2P49770 351 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 SEPHS1P49903 392 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 CDH12P55289 794 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ITGA1P56199 1179 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 DCDC1P59894 354 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 C2orf80Q0P641 193 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 TP53BP2Q13625 1128 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 GANABQ14697 944 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 DHCR24Q15392 516 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SLC5A12Q1EHB4 618 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 RFX4Q33E94 735 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 INAVAQ3KP66 663 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 NIPAL1Q6NVV3 410 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 MED27Q6P2C8 311 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 CCDC103Q8IW40 242 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 RBM12BQ8IXT5 1001 aaKnown RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 CACTIN-AS1Q8N1I8 211 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 C12orf76Q8N812 135 aaPredicted RBP10.37□□□□□ -0.75
VPS52-217ENST00000478934 SETD9Q8NE22 299 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 OR9Q2Q8NGE9 314 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 UCN3Q969E3 161 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 LGALS12Q96DT0 336 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 SLC35A5Q9BS91 424 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ASPSCR1Q9BZE9 553 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 HMG20AQ9NP66 347 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 ITM2CQ9NQX7 267 aa10.37□□□□□ -0.75
VPS52-217ENST00000478934 LOC100506127A0A0U1RQW1 187 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PIPSLA2A3N6 862 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 A8MU76 341 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 UGDHO60701 494 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 LILRB5O75023 590 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 C9P02748 559 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 CISD3P0C7P0 127 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ACVR2AP27037 513 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 GRK5P34947 590 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ST13P50502 369 aaKnown RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 TAP2Q03519 686 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ZNF658BQ4V348 819 aaPredicted RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 RAET1GQ6H3X3 334 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 FAHD1Q6P587 224 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 MSANTD1Q6ZTZ1 278 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 CADM3Q8N126 398 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 MFSD4AQ8N468 514 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 MRPL43Q8N983 215 aaKnown RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 PLA2G15Q8NCC3 412 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 DYNC2LI1Q8TCX1 351 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 UTP15Q8TED0 518 aaKnown RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 ARRDC3Q96B67 414 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 COQ8BQ96D53 544 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 APOL4Q9BPW4 351 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 RSPO3Q9BXY4 272 aaPredicted RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 ROGDIQ9GZN7 287 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 ABCB10Q9NRK6 738 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 GPR83Q9NYM4 423 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 MYO15AQ9UKN7 3530 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PRAMEF33A0A0G2JMD5 474 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 WASHC1A8K0Z3 465 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 EFCAB9A8MZ26 197 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 TNFRSF11BO00300 401 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PCDH17O14917 1159 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PRMT3O60678 531 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PRAMEF10O60809 474 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 TIMP1P01033 207 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 STATHP02808 62 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 CYP17A1P05093 508 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 HSMCR30P0CW71 290 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 DBTP11182 482 aaKnown RBP10.36□□□□□ -0.75
VPS52-217ENST00000478934 JUNDP17535 347 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 PTGER1P34995 402 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 TGFBR2P37173 567 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 DGKGP49619 791 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 KCNC3Q14003 757 aa10.36□□□□□ -0.75
VPS52-217ENST00000478934 KEAP1Q14145 624 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms