RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ARGFXA6NJG6 315 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 H0YIG0 161 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ERVH48-1M5A8F1 160 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SAP18O00422 153 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PPP6CO00743 305 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 GALR3O60755 368 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ALOX12BO75342 701 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 JRKO75564 520 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CLEC3AO75596 197 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 DNAJB5O75953 348 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CLDN9O95484 217 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 OTCP00480 354 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ALBP02768 609 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 HEXBP07686 556 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CD63P08962 238 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 GSTM2P28161 218 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 CASP2P42575 452 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 BTN3A2P78410 334 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PHEXP78562 749 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 RHDQ02161 417 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SLC18A2Q05940 514 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 TRAF3Q13114 568 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 LIPJQ5W064 366 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 TTC19Q6DKK2 380 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 METTL2BQ6P1Q9 378 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 TRIM40Q6P9F5 258 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZYG11AQ6WRX3 759 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 LAPTM4BQ86VI4 370 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 SLC22A9Q8IVM8 553 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZC3H7AQ8IWR0 971 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ARMC2Q8NEN0 867 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 OR7G3Q8NG95 312 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 OR51Q1Q8NH59 317 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 HUS1BQ8NHY5 278 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 GAL3ST3Q96A11 431 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 REPS1Q96D71 796 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MTFMTQ96DP5 389 aaKnown RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MS4A6EQ96DS6 147 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PEX11GQ96HA9 241 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 FAM111AQ96PZ2 611 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 F2RL3Q96RI0 385 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MESP1Q9BRJ9 268 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 RHBGQ9H310 441 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 NT5DC2Q9H857 520 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 COPS7BQ9H9Q2 264 aaPredicted RBP6.53□□□□□ -1.36
BRCA1-215ENST00000478531 C14orf105Q9NVL8 296 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 COPG2Q9UBF2 871 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 C3orf18Q9UK00 162 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 MKL2Q9ULH7 1088 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 PCDHGA11Q9Y5H2 935 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 ZNF462Q96JM2 2506 aa6.53□□□□□ -1.36
BRCA1-215ENST00000478531 COL6A6A6NMZ7 2263 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 LRIT2A6NDA9 550 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 OR2W5A6NFC9 320 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 VSTM2BA6NLU5 285 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 IDSB3KWA1 339 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 G3V2L1 256 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 MASP2O00187 686 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 UGDHO60701 494 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 TBX6O95947 436 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 ONECUT2O95948 504 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 TGFB1P01137 390 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 ITGB2P05107 769 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CPA3P15088 417 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CREB1P16220 341 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CERS1P27544 350 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 HPDP32754 393 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CCR10P46092 362 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 NEK2P51955 445 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 RAP1GDS1P52306 607 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 PRKAA2P54646 552 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 POLE2P56282 527 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CLCQ05315 142 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 E2F2Q14209 437 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 LY6DQ14210 128 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 SSPNQ14714 243 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 ZRSR2Q15696 482 aaKnown RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CRTC2Q53ET0 693 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 UNC50Q53HI1 259 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 SGO1Q5FBB7 561 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 CFAP157Q5JU67 520 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 BEND6Q5SZJ8 279 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 LETMD1Q6P1Q0 360 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 PPP1R32Q7Z5V6 425 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 MILR1Q7Z6M3 343 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 C10orf107Q8IVU9 208 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 LAS2Q8IYD9 372 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 AFAP1L2Q8N4X5 818 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 BANPQ8N9N5 519 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 L3MBTL4Q8NA19 623 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 OR2L5Q8NG80 312 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 OR4F6Q8NGB9 312 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 ADAMTS17Q8TE56 1095 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF473Q8WTR7 871 aaKnown RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 APOBEC4Q8WW27 367 aaKnown RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 THAP4Q8WY91 577 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 TTC9Q92623 222 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 C8orf44Q96CB5 159 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 SEC16BQ96JE7 1060 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms