RNA–Protein interactions for RNA: ENST00000478507.1

TDP2-204, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 5

Gene TDP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-204ENST00000478507 PPIEQ9UNP9 301 aaKnown RBP11.94□□□□□ -0.5
TDP2-204ENST00000478507 RNF6Q9Y252 685 aa11.94□□□□□ -0.5
TDP2-204ENST00000478507 KLF13Q9Y2Y9 288 aaPredicted RBP11.94□□□□□ -0.5
TDP2-204ENST00000478507 CLDN16Q9Y5I7 305 aa11.94□□□□□ -0.5
TDP2-204ENST00000478507 DNHD1Q96M86 4753 aa11.94□□□□□ -0.5
TDP2-204ENST00000478507 C4orf51C9J302 202 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 TFECO14948 347 aaPredicted RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 SLC16A5O15375 505 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 OR1F1O43749 312 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 HS6ST1O60243 411 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 PRMT3O60678 531 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 B4GALT2O60909 372 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 TPOP07202 933 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 ZNF888P0CJ79 500 aaPredicted RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 SMIM10L1P0DMW3 83 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 GABRB3P28472 473 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 CHRNB4P30926 498 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 RFC3P40938 356 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 VPS41P49754 854 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 CCR8P51685 355 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 TERF1P54274 439 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 NIPAL1Q6NVV3 410 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 TTC27Q6P3X3 843 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 PAQR3Q6TCH7 311 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 CEP128Q6ZU80 1094 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 MDGA2Q7Z553 956 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 DMRTC2Q8IXT2 367 aaPredicted RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 CALML6Q8TD86 181 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 UTP15Q8TED0 518 aaKnown RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 MAIP1Q8WWC4 291 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 PYCR2Q96C36 320 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 SNF8Q96H20 258 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 SMIM10Q96HG1 83 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 SIGLEC10Q96LC7 697 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 NDNQ99608 321 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 SLC6A16Q9GZN6 736 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 AICDAQ9GZX7 198 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 CLK4Q9HAZ1 481 aaKnown RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 XAB2Q9HCS7 855 aaKnown RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 NECTIN3Q9NQS3 549 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 PRDM9Q9NQV7 894 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 C20orf96Q9NUD7 363 aaPredicted RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 ZFP69BQ9UJL9 534 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 ANKHD1Q8IWZ3 2542 aaKnown RBP11.93□□□□□ -0.5
TDP2-204ENST00000478507 ABCA4P78363 2273 aa11.93□□□□□ -0.5
TDP2-204ENST00000478507 NKX2-6A6NCS4 301 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 KLRC4-KLRK1H3BQV0 150 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 FCHO1O14526 889 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 PEX1O43933 1283 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 HOXD4P09016 255 aaPredicted RBP11.92□□□□□ -0.5
TDP2-204ENST00000478507 SCTRP47872 440 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 GPR143P51810 404 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 CDKN2DP55273 166 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 TERF2Q15554 542 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 HSP90AA5PQ58FG0 334 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 CATSPEREQ5SY80 951 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 DUPD1Q68J44 220 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 TMEM211Q6ICI0 200 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 ARHGAP11AQ6P4F7 1023 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 ANKRD53Q8N9V6 530 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 C2CD4AQ8NCU7 369 aaPredicted RBP11.92□□□□□ -0.5
TDP2-204ENST00000478507 OR52N2Q8NGI0 321 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 ASB5Q8WWX0 329 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 NEIL2Q969S2 332 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 UCK2Q9BZX2 261 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 TP63Q9H3D4 680 aaPredicted RBP11.92□□□□□ -0.5
TDP2-204ENST00000478507 HOMER3Q9NSC5 361 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 DEPPQ9NTK1 212 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 TRMT6Q9UJA5 497 aaKnown RBP11.92□□□□□ -0.5
TDP2-204ENST00000478507 EML6Q6ZMW3 1958 aa11.92□□□□□ -0.5
TDP2-204ENST00000478507 TMEM200CA6NKL6 621 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 GOLGA8MH3BSY2 632 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 ITGA10O75578 1167 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 RNH1P13489 461 aaKnown RBP11.91□□□□□ -0.5
TDP2-204ENST00000478507 AHRP35869 848 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 RGS4P49798 205 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 ART1P52961 327 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 AP1S2P56377 157 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 SKP1P63208 163 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 REEP5Q00765 189 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 RGS1Q08116 209 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 RBM20Q5T481 1227 aaKnown RBP11.91□□□□□ -0.5
TDP2-204ENST00000478507 UGT3A1Q6NUS8 523 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 ABHD13Q7L211 337 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 SCUBE1Q8IWY4 988 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 CYP4X1Q8N118 509 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 CYP4Z2PQ8N1L4 340 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 MYO1HQ8N1T3 1032 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 B3GNT7Q8NFL0 401 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 RND1Q92730 232 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 ALKBH8Q96BT7 664 aaKnown RBP11.91□□□□□ -0.5
TDP2-204ENST00000478507 FBXL8Q96CD0 374 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 SEC16BQ96JE7 1060 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 FAM167BQ9BTA0 163 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 DEFB126Q9BYW3 111 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 CXXC4Q9H2H0 198 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 ZDHHC11Q9H8X9 412 aa11.91□□□□□ -0.5
TDP2-204ENST00000478507 TAS2R13Q9NYV9 303 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms