RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 CDC40O60508 579 aaKnown RBP eCLIP9.02□□□□□ -0.97
CCM2-210ENST00000478169 B4GALT2O60909 372 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 HOXD4P09016 255 aaPredicted RBP9.02□□□□□ -0.97
CCM2-210ENST00000478169 HIST1H2AGP0C0S8 130 aaPredicted RBP9.02□□□□□ -0.97
CCM2-210ENST00000478169 MLNP12872 115 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 CD99P14209 185 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 HIST1H2ADP20671 130 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 SLC1A2P43004 574 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 KCNJ1P48048 391 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 RGS4P49798 205 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 CCR8P51685 355 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 CLCN2P51788 898 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 RGS1Q08116 209 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 CMPK2Q5EBM0 449 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 PAOXQ6QHF9 649 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 KIAA0408Q6ZU52 694 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 ACAD11Q709F0 780 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 ABHD13Q7L211 337 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 CAND1Q86VP6 1230 aaKnown RBP9.02□□□□□ -0.97
CCM2-210ENST00000478169 TMEM156Q8N614 296 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 ARMC2Q8NEN0 867 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 NT5CQ8TCD5 201 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 HIST1H2AHQ96KK5 128 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 HIST1H2AJQ99878 128 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 H2AFJQ9BTM1 129 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 UCK2Q9BZX2 261 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 PRDM9Q9NQV7 894 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 HOMER3Q9NSC5 361 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 ADAMTS6Q9UKP5 1117 aa9.02□□□□□ -0.97
CCM2-210ENST00000478169 URADA6NGE7 173 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 FAM90A27PA6NNH2 459 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 PSMD12O00232 456 aaPredicted RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 CEP104O60308 925 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 DIAPH2O60879 1101 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 DNAJB6O75190 326 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 HAUS5O94927 633 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 NADKO95544 446 aaPredicted RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 FGGP02679 453 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 F7P08709 466 aaPredicted RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 RNH1P13489 461 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 DNAJA1P31689 397 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 AHRP35869 848 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 RFC3P40938 356 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 OLR1P78380 273 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 BTG2P78543 158 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 DHX9Q08211 1270 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 TERF2Q15554 542 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 DUPD1Q68J44 220 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 MBOAT1Q6ZNC8 495 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 TMEM200AQ86VY9 491 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 SPNS2Q8IVW8 549 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 CLYBLQ8N0X4 340 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 CYP4Z2PQ8N1L4 340 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 MYO1HQ8N1T3 1032 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 APCDD1LQ8NCL9 501 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 CHDHQ8NE62 594 aaPredicted RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 B3GNT7Q8NFL0 401 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 OR52N2Q8NGI0 321 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 UTP15Q8TED0 518 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 EEF1AKMT1Q8WVE0 214 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 NINJ1Q92982 152 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 ALKBH8Q96BT7 664 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 SNF8Q96H20 258 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 FOXC2Q99958 501 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 AARSD1Q9BTE6 412 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 XAB2Q9HCS7 855 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 TIMMDC1Q9NPL8 285 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 TAS2R13Q9NYV9 303 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 TRMT6Q9UJA5 497 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 ZFP69BQ9UJL9 534 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 FBXO5Q9UKT4 447 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 GUCA1BQ9UMX6 200 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 PPIEQ9UNP9 301 aaKnown RBP9.01□□□□□ -0.97
CCM2-210ENST00000478169 FREM3P0C091 2139 aa9.01□□□□□ -0.97
CCM2-210ENST00000478169 ABCA2Q9BZC7 2435 aa9□□□□□ -0.97
CCM2-210ENST00000478169 PABPN1LA6NDY0 278 aaKnown RBP9□□□□□ -0.97
CCM2-210ENST00000478169 KLK8O60259 260 aa9□□□□□ -0.97
CCM2-210ENST00000478169 ITGA10O75578 1167 aa9□□□□□ -0.97
CCM2-210ENST00000478169 ZWINTO95229 277 aa9□□□□□ -0.97
CCM2-210ENST00000478169 TUBB4AP04350 444 aa9□□□□□ -0.97
CCM2-210ENST00000478169 SERPIND1P05546 499 aa9□□□□□ -0.97
CCM2-210ENST00000478169 ZNF888P0CJ79 500 aaPredicted RBP9□□□□□ -0.97
CCM2-210ENST00000478169 MAOAP21397 527 aa9□□□□□ -0.97
CCM2-210ENST00000478169 SCTRP47872 440 aa9□□□□□ -0.97
CCM2-210ENST00000478169 IST1P53990 364 aa9□□□□□ -0.97
CCM2-210ENST00000478169 AP1S2P56377 157 aa9□□□□□ -0.97
CCM2-210ENST00000478169 NUP107P57740 925 aa9□□□□□ -0.97
CCM2-210ENST00000478169 TIAL1Q01085 375 aaKnown RBP eCLIP9□□□□□ -0.97
CCM2-210ENST00000478169 FOLH1Q04609 750 aa9□□□□□ -0.97
CCM2-210ENST00000478169 PMPCAQ10713 525 aa9□□□□□ -0.97
CCM2-210ENST00000478169 GPS1Q13098 491 aa9□□□□□ -0.97
CCM2-210ENST00000478169 TRIP13Q15645 432 aaPredicted RBP9□□□□□ -0.97
CCM2-210ENST00000478169 PHKG1Q16816 387 aa9□□□□□ -0.97
CCM2-210ENST00000478169 EMC4Q5J8M3 183 aa9□□□□□ -0.97
CCM2-210ENST00000478169 RGS9BPQ6ZS82 235 aa9□□□□□ -0.97
CCM2-210ENST00000478169 MDGA2Q7Z553 956 aa9□□□□□ -0.97
CCM2-210ENST00000478169 CCDC71Q8IV32 467 aaPredicted RBP9□□□□□ -0.97
CCM2-210ENST00000478169 GPALPP1Q8IXQ4 340 aa9□□□□□ -0.97
CCM2-210ENST00000478169 GPATCH11Q8N954 259 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms