RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 TGFB1P01137 390 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 FAM87AP0C7U9 286 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 GSTM2P28161 218 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 XCR1P46094 333 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 NEK2P51955 445 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 PLA2G16P53816 162 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 PRKAA2P54646 552 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 STXBP1P61764 594 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 BTN3A2P78410 334 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 RHDQ02161 417 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 PCDH1Q08174 1060 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 TRAF3Q13114 568 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ZRSR2Q15696 482 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 LINC00303Q3SY05 128 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CCDC153Q494R4 210 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CRTC2Q53ET0 693 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 BEND6Q5SZJ8 279 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 MFSD4BQ5TF39 518 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 LIPJQ5W064 366 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CPZQ66K79 652 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 BORAQ6PGQ7 559 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ZYG11AQ6WRX3 759 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 MRGPREQ86SM8 312 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 RAB43Q86YS6 212 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ZC3H7AQ8IWR0 971 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 LAS2Q8IYD9 372 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 IQCKQ8N0W5 287 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CCNYL1Q8N7R7 359 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 BANPQ8N9N5 519 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ARMC2Q8NEN0 867 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 OR4F6Q8NGB9 312 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 OR51Q1Q8NH59 317 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 HUS1BQ8NHY5 278 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ZNF473Q8WTR7 871 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 UBE2E3Q969T4 207 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 GAL3ST3Q96A11 431 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 MS4A6EQ96DS6 147 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 PEX11GQ96HA9 241 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 F2RL3Q96RI0 385 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 SMC6Q96SB8 1091 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 MTERF1Q99551 399 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 ARHGAP9Q9BRR9 750 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 CRB3Q9BUF7 120 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 FAM117AQ9C073 453 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 REXO4Q9GZR2 422 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 IQCGQ9H095 443 aaKnown RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 RHBGQ9H310 441 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 WDR54Q9H977 334 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 MKKSQ9NPJ1 570 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-222ENST00000478095 C14orf105Q9NVL8 296 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 SLC17A7Q9P2U7 560 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 C3orf18Q9UK00 162 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 POLHQ9Y253 713 aa9.72□□□□□ -0.85
HDAC6-222ENST00000478095 LOC400499M0QZD8 3231 aa9.71□□□□□ -0.85
HDAC6-222ENST00000478095 KMT2BQ9UMN6 2715 aaPredicted RBP9.71□□□□□ -0.85
HDAC6-222ENST00000478095 IGLV3-12A0A075B6K2 115 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 LRIT2A6NDA9 550 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 OR2W5A6NFC9 320 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 RTCAO00442 366 aaKnown RBP9.71□□□□□ -0.86
HDAC6-222ENST00000478095 UGDHO60701 494 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 ALOX12BO75342 701 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 CDC123O75794 336 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-222ENST00000478095 DNAJB5O75953 348 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 ITGB2P05107 769 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 CD63P08962 238 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 CPA3P15088 417 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 IMPDH1P20839 514 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 CCR10P46092 362 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 EFNA3P52797 238 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 CLCQ05315 142 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 SSPNQ14714 243 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MINDY4Q4G0A6 757 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 TTC19Q6DKK2 380 aaPredicted RBP9.71□□□□□ -0.86
HDAC6-222ENST00000478095 FAAH2Q6GMR7 532 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 LETMD1Q6P1Q0 360 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 BRICD5Q6PL45 260 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 PCSK4Q6UW60 755 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 PPP1R32Q7Z5V6 425 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MILR1Q7Z6M3 343 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 SLC22A9Q8IVM8 553 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 L3MBTL4Q8NA19 623 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 TCP10LQ8TDR4 215 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 THAP4Q8WY91 577 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MTFMTQ96DP5 389 aaKnown RBP9.71□□□□□ -0.86
HDAC6-222ENST00000478095 SEC16BQ96JE7 1060 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 FAR2Q96K12 515 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 CATSPER2Q96P56 530 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 FAM111AQ96PZ2 611 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 NTMT1Q9BV86 223 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 C1QTNF3Q9BXJ4 246 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MS4A8Q9BY19 250 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 OR51B5Q9H339 312 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 DMRT3Q9NQL9 472 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MKS1Q9NXB0 559 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MKL2Q9ULH7 1088 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 PLLPQ9Y342 182 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 PCDHGA11Q9Y5H2 935 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 HS3ST3B1Q9Y662 390 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 KCNMB2Q9Y691 235 aa9.71□□□□□ -0.86
HDAC6-222ENST00000478095 MAGEB17A8MXT2 336 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms