RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 PLCZ1Q86YW0 608 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 VRK3Q8IV63 474 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 DHX40Q8IX18 779 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TIGD4Q8IY51 512 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CDK20Q8IZL9 346 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NAGSQ8N159 534 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 C17orf78Q8N4C9 275 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CPSF7Q8N684 471 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CEP112Q8N8E3 955 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 C12orf29Q8N999 325 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TC2NQ8N9U0 490 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 MLKLQ8NB16 471 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CAMKVQ8NCB2 501 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 C19orf18Q8NEA5 215 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF397Q8NF99 534 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 OR13F1Q8NGS4 319 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 DTD1Q8TEA8 209 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 KBTBD7Q8WVZ9 684 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ASB10Q8WXI3 467 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SMG7Q92540 1137 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 LPGAT1Q92604 370 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TMEM125Q96AQ2 219 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ECHDC3Q96DC8 303 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SNRNP40Q96DI7 357 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ZFYVE19Q96K21 471 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 OLFM3Q96PB7 478 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CSPG4P5Q96PW8 444 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TEFMQ96QE5 360 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PCYT2Q99447 389 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CTRCQ99895 268 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 EGFL8Q99944 293 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 GON7Q9BXV9 100 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NLNQ9BYT8 704 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ANKRD60Q9BZ19 345 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 OSBPL8Q9BZF1 889 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 MFFQ9GZY8 342 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 FOXP1Q9H334 677 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 UBQLN3Q9H347 655 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SAV1Q9H4B6 383 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 KAT14Q9H8E8 782 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CHODLQ9H9P2 273 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 GPN1Q9HCN4 374 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF302Q9NR11 478 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 C20orf96Q9NUD7 363 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 CMTM6Q9NX76 183 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SPG21Q9NZD8 308 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 TESQ9UGI8 421 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ING1Q9UK53 422 aaPredicted RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ADAM28Q9UKQ2 775 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SARDHQ9UL12 918 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 DAPP1Q9UN19 280 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PPIEQ9UNP9 301 aaKnown RBP3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SHOC2Q9UQ13 582 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SHPRHQ149N8 1683 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 ASXL1Q8IXJ9 1541 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 UTYO14607 1347 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 UBN2Q6ZU65 1347 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 SETBP1Q9Y6X0 1596 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 RAB3GAP2Q9H2M9 1393 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 PLEKHG1Q9ULL1 1385 aa3.38□□□□□ -1.87
FNDC3B-209ENST00000478016 NHSL1Q5SYE7 1610 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 ADGRL3Q9HAR2 1447 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 LOC100509620A0A075B734 347 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 CCDC187A0A096LP49 1063 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A0A6YYH2 397 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 A0A1B0GVG6 124 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 GRID2IPA4D2P6 1211 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM90A18PA6NE21 464 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM90A16PA6NEW6 464 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 MGAT4DA6NG13 374 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM90A20PA6NIJ5 464 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 A6NJ64 397 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 ASB14A6NK59 587 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 ZNF729A6NN14 1252 aaPredicted RBP3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM90A9PA6NNJ1 464 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 FAM90A5PA8MXJ8 464 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 C2orf74A8MZ97 194 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 M0QYG6 137 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 CTDSP2O14595 271 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 ANKRD28O15084 1053 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 ADAMDEC1O15204 470 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 CLIC2O15247 247 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 EIF3HO15372 352 aaKnown RBP eCLIP3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 RNMTO43148 476 aaKnown RBP3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 KLK10O43240 276 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 BUD23O43709 281 aaKnown RBP3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 KDELR3O43731 214 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 LANCL1O43813 399 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 PFDN1O60925 122 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 NOS1APO75052 506 aaPredicted RBP3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 ATP2C2O75185 946 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 CDH16O75309 829 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 TAF5LO75529 589 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 KDM4BO94953 1096 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 UNC5CO95185 931 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 STBD1O95210 358 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 CXCL14O95715 111 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 SLC16A8O95907 504 aa3.37□□□□□ -1.87
FNDC3B-209ENST00000478016 MT-ND2P03891 347 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms