RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 LACC1Q8IV20 430 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 KRT222Q8N1A0 295 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 KCT2Q8NC54 265 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 B3GNT7Q8NFL0 401 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 TBC1D20Q96BZ9 403 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 PTCHD1Q96NR3 888 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 PRAP1Q96NZ9 151 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 REG4Q9BYZ8 158 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 AMBRA1Q9C0C7 1298 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 C10orf88Q9H8K7 445 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 UBTD1Q9HAC8 227 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 ANKHQ9HCJ1 492 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 HPF1Q9NWY4 346 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 CTTNBP2NLQ9P2B4 639 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 UVRAGQ9P2Y5 699 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 TAC3Q9UHF0 121 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 FBXW2Q9UKT8 454 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 RUVBL2Q9Y230 463 aaKnown RBP6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 NAALAD2Q9Y3Q0 740 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 TESMINQ9Y4I5 508 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 MRFAP1Q9Y605 127 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 SLC22A7Q9Y694 548 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 TGP01266 2768 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 PKD1L1Q8TDX9 2849 aa6.76□□□□□ -1.33
SPTLC1-205ENST00000477888 ABCA1O95477 2261 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 CCDC162PA2VCL2 907 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 EEF1E1-BLOC1S5C9J1V9 151 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 F8W8V4 182 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 EEF1E1O43324 174 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 PRKNO60260 465 aaPredicted RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 KIF5CO60282 957 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 B4GALT2O60909 372 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MATN4O95460 622 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 PSMB4P28070 264 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MC3RP41968 323 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 CDKN2BP42772 138 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 DNASE1L1P49184 302 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 ABATP80404 500 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 TFDP2Q14188 446 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 ARHGAP19Q14CB8 494 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 WIPI1Q5MNZ9 446 aaPredicted RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 LRRC38Q5VT99 294 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 NSUN5P2Q63ZY6 315 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 QSOX2Q6ZRP7 698 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 KLHDC8BQ8IXV7 354 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 OR9A1PQ8NGU1 263 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 NEIL3Q8TAT5 605 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MAGEC3Q8TD91 643 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 ASB15Q8WXK1 588 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 P3H4Q92791 437 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 SCYL1Q96KG9 808 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MARK4Q96L34 752 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 QKIQ96PU8 341 aaKnown RBP eCLIP6.75□□□□□ -1.331e-6■■□□□ 12.8
SPTLC1-205ENST00000477888 TIMP4Q99727 224 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 TBL1YQ9BQ87 522 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 OCSTAMPQ9BR26 566 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 AARSD1Q9BTE6 412 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 RBM24Q9BX46 236 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 TSSK1BQ9BXA7 367 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 HSD3B7Q9H2F3 369 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 EXO5Q9H790 373 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 LIN28AQ9H9Z2 209 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 LRTM1Q9HBL6 345 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 ACKR4Q9NPB9 350 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 SPTLC3Q9NUV7 552 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 GALNT8Q9NY28 637 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 TUBA8Q9NY65 449 aaPredicted RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MYOTQ9UBF9 498 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 NDRG3Q9UGV2 375 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 LCMT1Q9UIC8 334 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 CDC42EP3Q9UKI2 254 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 R3HDM2Q9Y2K5 976 aaKnown RBP6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MGAM2Q2M2H8 2515 aa6.75□□□□□ -1.33
SPTLC1-205ENST00000477888 MBD3L3A6NE82 208 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ZNF860A6NHJ4 632 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 CD8B2A6NJW9 211 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 A8MUA0 341 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 HACD1B0YJ81 288 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 E7ENX8 843 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 MYO1CO00159 1063 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 CHST10O43529 356 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ZFAND5O76080 213 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 CCNDBP1O95273 360 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 KRT1P04264 644 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 RFPL3SP0C7P2 107 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 MAOAP21397 527 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 JAK1P23458 1154 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 LOXP28300 417 aaPredicted RBP6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 RBL1P28749 1068 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SOX18P35713 384 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SOX3P41225 446 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 ATP5J2P56134 94 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 UBE2HP62256 183 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 TAP2Q03519 686 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 HYAL2Q12891 473 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 PRPSAP1Q14558 356 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 SEMA3AQ14563 771 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 TERF2Q15554 542 aa6.74□□□□□ -1.33
SPTLC1-205ENST00000477888 CLEC12BQ2HXU8 276 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms