RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 ASB11Q8WXH4 323 aa14.08□□□□□ -0.15
HDAC6-220ENST00000477528 GTF2H4Q92759 462 aa14.08□□□□□ -0.15
HDAC6-220ENST00000477528 NUMBLQ9Y6R0 609 aa14.08□□□□□ -0.15
HDAC6-220ENST00000477528 OR7A17O14581 309 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 HLA-FP30511 346 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 DCTP40126 519 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 VEGFBP49765 207 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 SBSNQ6UWP8 590 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 ENPP7Q6UWV6 458 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 Q6ZSR9 355 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF513Q8N8E2 541 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-220ENST00000477528 OR2T11Q8NH01 316 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF671Q8TAW3 534 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 HCFC1R1Q9NWW0 138 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 RPP38P78345 283 aaKnown RBP14.08□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF155Q12901 538 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-220ENST00000477528 MBTPS1Q14703 1052 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 EIPR1Q53HC9 387 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 UNC5DQ6UXZ4 953 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 DPPA4Q7L190 304 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 LINC01599Q8WXQ3 324 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 P2RY13Q9BPV8 354 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 CNPPD1Q9BV87 410 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 POLR2J2Q9GZM3 115 aaKnown RBP14.08□□□□□ -0.16
HDAC6-220ENST00000477528 CFL2Q9Y281 166 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 AKT2P31751 481 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 SLC36A3Q495N2 470 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 OR56A1Q8NGH5 318 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 KLHL6Q8WZ60 621 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 CLIP3Q96DZ5 547 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF624Q9P2J8 865 aaPredicted RBP14.08□□□□□ -0.16
HDAC6-220ENST00000477528 HS3ST2Q9Y278 367 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 WBP11Q9Y2W2 641 aaKnown RBP14.08□□□□□ -0.16
HDAC6-220ENST00000477528 NUP205Q92621 2012 aa14.08□□□□□ -0.16
HDAC6-220ENST00000477528 C7orf72A4D263 438 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 AGR2O95994 175 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 GSTM2P28161 218 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 GTF2E2P29084 291 aaKnown RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 CAPZA2P47755 286 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 TOR1AIP1Q5JTV8 583 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 MINDY2Q8NBR6 621 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 OR7G3Q8NG95 312 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 UBTD2Q8WUN7 234 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 METTL2AQ96IZ6 378 aaKnown RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 IL17FQ96PD4 163 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 MCCC1Q96RQ3 725 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 EBF1Q9UH73 591 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 SLC1A7O00341 560 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HIST1H2ABP04908 130 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 CR2P20023 1033 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 NTHL1P78549 312 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 FCHO2Q0JRZ9 810 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 NPRL3Q12980 569 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 NDUFA9Q16795 377 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HIST3H2AQ7L7L0 130 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 TAF8Q7Z7C8 310 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 PARGQ86W56 976 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 LKAAEAR1Q8TD35 194 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 PIK3R3Q92569 461 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HIST1H2ACQ93077 130 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HSPBAP1Q96EW2 488 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 TUBB1Q9H4B7 451 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 J3QRK9 145 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HAT1O14929 419 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HOXC8P31273 242 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 GRSF1Q12849 480 aaKnown RBP eCLIP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 PMS2P3Q13401 168 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 QPRTQ15274 297 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HSF5Q4G112 596 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 BORAQ6PGQ7 559 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 VTCN1Q7Z7D3 282 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 FAM110BQ8TC76 370 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 HPS1Q92902 700 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 SMARCD2Q92925 531 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 TMIGD2Q96BF3 282 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 SIPA1Q96FS4 1042 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 FCRL4Q96PJ5 515 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 MTG2Q9H4K7 406 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 EHD1Q9H4M9 534 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 MGAT4BQ9UQ53 548 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 KLHL33A6NCF5 533 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 ARHGEF33A8MVX0 844 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF26P17031 533 aaPredicted RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 IGFBP4P22692 258 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 DPP6P42658 865 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 PIGFQ07326 219 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 GK3PQ14409 553 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 SUZ12Q15022 739 aaKnown RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 CEP78Q5JTW2 689 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 CXXC5Q7LFL8 322 aaKnown RBP14.07□□□□□ -0.16
HDAC6-220ENST00000477528 SERPINA11Q86U17 422 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 CARM1Q86X55 608 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 TESCQ96BS2 214 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 TAMM41Q96BW9 452 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 PIP5K1AQ99755 562 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 ABCD2Q9UBJ2 740 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 ITGB1BP2Q9UKP3 347 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 ITM2BQ9Y287 266 aa14.07□□□□□ -0.16
HDAC6-220ENST00000477528 PRLP01236 227 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms