RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MINDY3Q9H8M7 445 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 AGPAT3Q9NRZ7 376 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 AGPAT5Q9NUQ2 364 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 PAK5Q9P286 719 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 KLHL9Q9P2J3 617 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TBX21Q9UL17 535 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TRAF3IP3Q9Y228 551 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 YIPF1Q9Y548 306 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 ALPK3Q96L96 1907 aa3.67□□□□□ -1.82
UBR3-209ENST00000477461 TRIP11Q15643 1979 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 LOC100509620A0A075B734 347 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 A0A087X002 238 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 A0A0G2JNG1 304 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 A0A1B0GUA9 196 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 A0A1W2PQ09 198 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 GOLGA8IPA6NC78 632 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 ZNF233A6NK53 670 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 GOLGA8JA6NMD2 632 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 ANKRD63C9JTQ0 380 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 TMEM178BH3BS89 294 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 J3QR06 171 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 MAPK13O15264 365 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 B4GALT5O43286 388 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 STX10O60499 249 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 CLTAP09496 248 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 STAG3L1P0CL83 205 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 MMP9P14780 707 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 PORP16435 677 aaPredicted RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 TNNI1P19237 187 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 SP100P23497 879 aaPredicted RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 ACSL1P33121 698 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 OSTNP61366 133 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 CETN1Q12798 172 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 KIR2DS5Q14953 304 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 PCLAFQ15004 111 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 SNRNP35Q16560 246 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 HSP90AA4PQ58FG1 418 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 SLC39A4Q6P5W5 647 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 INTS8Q75QN2 995 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 LUZP1Q86V48 1076 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 CDR2LQ86X02 465 aaPredicted RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 C12orf56Q8IXR9 622 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 POC5Q8NA72 575 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 CNOT6LQ96LI5 555 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 FNBP1Q96RU3 617 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 CBWD1Q9BRT8 395 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 FAM213AQ9BRX8 229 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 APOL6Q9BWW8 343 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 MRPL1Q9BYD6 325 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 UBXN6Q9BZV1 441 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 MTIF3Q9H2K0 278 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 RPF1Q9H9Y2 349 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 SAMSN1Q9NSI8 373 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 GIMAP4Q9NUV9 329 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 CACNG5Q9UF02 275 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 ARMCX3Q9UH62 379 aaPredicted RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 TMEM5Q9Y2B1 443 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 STYXL1Q9Y6J8 313 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 RNF215Q9Y6U7 377 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 MICAL3Q7RTP6 2002 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 UMODL1Q5DID0 1318 aa3.66□□□□□ -1.82
UBR3-209ENST00000477461 TDRD15B5MCY1 1934 aaKnown RBP3.66□□□□□ -1.82
UBR3-209ENST00000477461 TET1Q8NFU7 2136 aa3.65□□□□□ -1.82
UBR3-209ENST00000477461 ANK1P16157 1881 aa3.65□□□□□ -1.82
UBR3-209ENST00000477461 RALGAPA2Q2PPJ7 1873 aa3.65□□□□□ -1.82
UBR3-209ENST00000477461 A0A1W2PPI3 338 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 hCG_1807616A0A1W2PRN6 198 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 A6NL46 340 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 HMGB1P1B2RPK0 211 aaPredicted RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 N4BP1O75113 896 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 AKAP3O75969 853 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 GFPT2O94808 682 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TSHBP01222 138 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TNNC2P02585 160 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 CXCL10P02778 98 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 EDN1P05305 212 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 DLATP10515 647 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 KRTAP5-9P26371 169 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 ADSSP30520 456 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 CASP4P49662 377 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 ACOT2P49753 483 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 SUOXP51687 545 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 ARSEP51690 589 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 VAMP7P51809 220 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 AP3M2P53677 418 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 DSCR10P59022 87 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 SIRPAP78324 504 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 POU5F1Q01860 360 aaKnown RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 CYP24A1Q07973 514 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 BFSP1Q12934 665 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 KIR2DS3Q14952 304 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TMEM132DQ14C87 1099 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 NTRK2Q16620 822 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 ZCWPW2Q504Y3 356 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 TCP11X2Q5H9J9 407 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 FFAR4Q5NUL3 377 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 PSRC1Q6PGN9 363 aaPredicted RBP3.65□□□□□ -1.83
UBR3-209ENST00000477461 PLXDC2Q6UX71 529 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 PACS1Q6VY07 963 aa3.65□□□□□ -1.83
UBR3-209ENST00000477461 SLC24A5Q71RS6 500 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms