RNA–Protein interactions for RNA: ENST00000476724.1

TMEM53-208, Transcript of transmembrane protein 53, humanhuman

TSL 1 (best)

Gene TMEM53, Length 2,075 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-208ENST00000476724 MSLNLQ96KJ4 702 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 RIPOR3Q96MK2 946 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 FUNDC2Q9BWH2 189 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 OR2AG1Q9H205 316 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 DMRT3Q9NQL9 472 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 TBC1D23Q9NUY8 699 aa15.79■□□□□ 0.12
TMEM53-208ENST00000476724 THUMPD1Q9NXG2 353 aaKnown RBP15.79■□□□□ 0.12
TMEM53-208ENST00000476724 PIPSLA2A3N6 862 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 PI15O43692 258 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 VEGFDO43915 354 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 NDUFS2O75306 463 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 INHBBP09529 407 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 ZNF8P17098 575 aaPredicted RBP15.78■□□□□ 0.12
TMEM53-208ENST00000476724 IL1RL1Q01638 556 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 TAP2Q03519 686 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 PDE7AQ13946 482 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 KIAA1614Q5VZ46 1190 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 RAET1GQ6H3X3 334 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 NXPE4Q6UWF7 544 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 COMMD6Q7Z4G1 85 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 LRRC56Q8IYG6 542 aaPredicted RBP15.78■□□□□ 0.12
TMEM53-208ENST00000476724 NAGSQ8N159 534 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 ATG16L2Q8NAA4 619 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 DRAXINQ8NBI3 349 aaPredicted RBP15.78■□□□□ 0.12
TMEM53-208ENST00000476724 SLC5A11Q8WWX8 675 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 PPP1R16AQ96I34 528 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 TRMT61BQ9BVS5 477 aaKnown RBP15.78■□□□□ 0.12
TMEM53-208ENST00000476724 CCDC90BQ9GZT6 254 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 RAD21L1Q9H4I0 556 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 PALMDQ9NP74 551 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 MYNNQ9NPC7 610 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 PAK1IP1Q9NWT1 392 aaPredicted RBP15.78■□□□□ 0.12
TMEM53-208ENST00000476724 ENPP5Q9UJA9 477 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 EXO1Q9UQ84 846 aaKnown RBP15.78■□□□□ 0.12
TMEM53-208ENST00000476724 MTCH2Q9Y6C9 303 aa15.78■□□□□ 0.12
TMEM53-208ENST00000476724 TMX2-CTNND1H3BSU7 103 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 LZTS3O60299 673 aaPredicted RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 DIRAS1O95057 198 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 NUDT7P0C024 238 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 CD247P20963 164 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 PTX3P26022 381 aaPredicted RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 WASP42768 502 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 SLC35A2P78381 396 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 EMX1Q04741 257 aaPredicted RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 BNIP3Q12983 259 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 FADDQ13158 208 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 GAB1Q13480 694 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 STARD3Q14849 445 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 UNC5DQ6UXZ4 953 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 TRMT11Q7Z4G4 463 aaKnown RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 B3GNT8Q7Z7M8 397 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 GALNT10Q86SR1 603 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 OR52N2Q8NGI0 321 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 OR2L2Q8NH16 312 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 MIPOL1Q8TD10 442 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 PITX2Q99697 317 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 TTYH1Q9H313 450 aaPredicted RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 PREBQ9HCU5 417 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 CCDC177Q9NQR7 707 aaPredicted RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 GALNT8Q9NY28 637 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 THAP10Q9P2Z0 257 aaPredicted RBP15.77■□□□□ 0.12
TMEM53-208ENST00000476724 COQ6Q9Y2Z9 468 aa15.77■□□□□ 0.12
TMEM53-208ENST00000476724 ADAMDEC1O15204 470 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 GPR37L1O60883 481 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 SH3BGRLO75368 114 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 NTRK1P04629 796 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 EPHX1P07099 455 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 FURINP09958 794 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 EFNA1P20827 205 aaPredicted RBP15.77■□□□□ 0.11
TMEM53-208ENST00000476724 MVKQ03426 396 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 ELAVL3Q14576 367 aaKnown RBP15.77■□□□□ 0.11
TMEM53-208ENST00000476724 LAPTM4AQ15012 233 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 ITPRIPL2Q3MIP1 535 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 TMEM52BQ4KMG9 183 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.77■□□□□ 0.11
TMEM53-208ENST00000476724 CRTC3Q6UUV7 619 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 ARMCX6Q7L4S7 300 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 METTL4Q8N3J2 472 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 SVOPQ8N4V2 548 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 RORBQ92753 470 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 PPP1R14BQ96C90 147 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 PPCDCQ96CD2 204 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF347Q96SE7 839 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 CSF3RQ99062 836 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 DGCR6LQ9BY27 220 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 RUBCNLQ9H714 662 aa15.77■□□□□ 0.11
TMEM53-208ENST00000476724 XPNPEP2O43895 674 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 POP7O75817 140 aaKnown RBP15.76■□□□□ 0.11
TMEM53-208ENST00000476724 CLPXO76031 633 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 C6P13671 934 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 ADRB3P13945 408 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 ACADLP28330 430 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 CRATP43155 626 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 PIGFQ07326 219 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 C2orf80Q0P641 193 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 NPRL3Q12980 569 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 MAD2L1BPQ15013 274 aaPredicted RBP15.76■□□□□ 0.11
TMEM53-208ENST00000476724 NPTX1Q15818 432 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 PROX2Q3B8N5 592 aa15.76■□□□□ 0.11
TMEM53-208ENST00000476724 ZNF385BQ569K4 471 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms