RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 LCN10Q6JVE6 187 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 ANKRD54Q6NXT1 300 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 NAPRTQ6XQN6 538 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 TMPRSS11FQ6ZWK6 438 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 SLC16A9Q7RTY1 509 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 SLC22A9Q8IVM8 553 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 LAX1Q8IWV1 398 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 BCORP1Q8N888 145 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 STKLD1Q8NE28 680 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 VANGL1Q8TAA9 524 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-215ENST00000476664 SLC26A7Q8TE54 656 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 RLN3Q8WXF3 142 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 PHF21BQ96EK2 531 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 ZNF419Q96HQ0 510 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-215ENST00000476664 THOC3Q96J01 351 aaKnown RBP6.47□□□□□ -1.37
LRCH3-215ENST00000476664 ZNF582Q96NG8 517 aaPredicted RBP6.47□□□□□ -1.37
LRCH3-215ENST00000476664 COQ7Q99807 217 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 AIFM2Q9BRQ8 373 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 LHPPQ9H008 270 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 COG4Q9H9E3 785 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 PTGFRNQ9P2B2 879 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 ATXN10Q9UBB4 475 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 DLGAP4Q9Y2H0 992 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 COL12A1Q99715 3063 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 MROH5Q6ZUA9 1318 aa6.47□□□□□ -1.37
LRCH3-215ENST00000476664 UNC119BA6NIH7 251 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 H0YIG0 161 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 H3BMM5 538 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 H7C1Q1 480 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PRRG1O14668 218 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PI15O43692 258 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 LIPFP07098 398 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ASNSP08243 561 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CCDC130P13994 396 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PTPN6P29350 595 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 HLA-FP30511 346 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 HIBADHP31937 336 aaKnown RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CCR1P32246 355 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CETN2P41208 172 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ETV1P50549 477 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PLCD1P51178 756 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 BACE1P56817 501 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CCZ1BP86790 482 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CCZ1P86791 482 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 FOXM1Q08050 763 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PTGISQ16647 500 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 N4BP2L1Q5TBK1 243 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 LYSMD4Q5XG99 296 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 FRG2Q64ET8 278 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 BTNL8Q6UX41 500 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 TMEM26Q6ZUK4 368 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 SLC29A4Q7RTT9 530 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 NANOGNBQ7Z5D8 188 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ARL14Q8N4G2 192 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 SLC25A41Q8N5S1 370 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 GCSAMQ8N6F7 178 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 LRRC57Q8N9N7 239 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 MNS1Q8NEH6 495 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 AKR7LQ8NHP1 331 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ZNF671Q8TAW3 534 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 MIPOL1Q8TD10 442 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PROX1Q92786 737 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ERGIC1Q969X5 290 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 DHTKD1Q96HY7 919 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CDK5RAP1Q96SZ6 601 aaKnown RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 LMF2Q9BU23 707 aaKnown RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 TRMOQ9BU70 441 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 SIRPDQ9H106 197 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 STMN4Q9H169 189 aaPredicted RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 MFSD1Q9H3U5 465 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 TOR3AQ9H497 397 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ACTR8Q9H981 624 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 PCMTD2Q9NV79 361 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 ZNHIT6Q9NWK9 470 aaKnown RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 DONSONQ9NYP3 566 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 GTSE1Q9NYZ3 720 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 RHCGQ9UBD6 479 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 CNOT6Q9ULM6 557 aaKnown RBP6.46□□□□□ -1.38
LRCH3-215ENST00000476664 B3GALT5Q9Y2C3 310 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 SH3GLB1Q9Y371 365 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 MAST3O60307 1309 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 KIF16BQ96L93 1317 aa6.46□□□□□ -1.38
LRCH3-215ENST00000476664 NLRC5Q86WI3 1866 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 KRTAP23-1A1A580 65 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 ANKRD28O15084 1053 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 LINC01565O15544 149 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 LANCL1O43813 399 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 CACNG3O60359 315 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 CSO75390 466 aaKnown RBP6.45□□□□□ -1.38
LRCH3-215ENST00000476664 CSDE1O75534 798 aaKnown RBP6.45□□□□□ -1.38
LRCH3-215ENST00000476664 RHBDL1O75783 438 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 YES1P07947 543 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 ATP6V1C1P21283 382 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 PRDX6P30041 224 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 CCT8P50990 548 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 GSDMDP57764 484 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 HAND2P61296 217 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 HYAL1Q12794 435 aa6.45□□□□□ -1.38
LRCH3-215ENST00000476664 ILF2Q12905 390 aaKnown RBP6.45□□□□□ -1.38
LRCH3-215ENST00000476664 EFTUD2Q15029 972 aaKnown RBP eCLIP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms