RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 OR52J3Q8NH60 311 aa17.06■□□□□ 0.32
CCM2-207ENST00000475551 SPON2Q9BUD6 331 aa17.06■□□□□ 0.32
CCM2-207ENST00000475551 MIXL1Q9H2W2 232 aa17.06■□□□□ 0.32
CCM2-207ENST00000475551 ABCB9Q9NP78 766 aa17.06■□□□□ 0.32
CCM2-207ENST00000475551 OGDHLQ9ULD0 1010 aa17.06■□□□□ 0.32
CCM2-207ENST00000475551 CORO2BQ9UQ03 480 aa17.06■□□□□ 0.32
CCM2-207ENST00000475551 HTTP42858 3142 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SERTM1A2A2V5 107 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 FABP12A6NFH5 140 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 PLA2G10O15496 165 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 NBNO60934 754 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 GCM2O75603 506 aaPredicted RBP17.05■□□□□ 0.32
CCM2-207ENST00000475551 ANXA5P08758 320 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 ALAS2P22557 587 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 CSTF2P33240 577 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCM2-207ENST00000475551 CDH12P55289 794 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 RING1Q06587 406 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 GPR19Q15760 415 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 GPRC6AQ5T6X5 926 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 MBOAT1Q6ZNC8 495 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 RBFAQ8N0V3 343 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 ENKURQ8TC29 256 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SLC25A46Q96AG3 418 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 BOCQ9BWV1 1114 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 GTPBP2Q9BX10 602 aaKnown RBP17.05■□□□□ 0.32
CCM2-207ENST00000475551 PRRG3Q9BZD7 231 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 ABCG8Q9H221 673 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SH3BP4Q9P0V3 963 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 TMPRSS11EQ9UL52 423 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SPEF1Q9Y4P9 236 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 CHD5Q8TDI0 1954 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 ZAR1LA6NP61 321 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 F5H5T6 163 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 CSF2P04141 144 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 HLA-EP13747 358 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 COX7A2P14406 83 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 PPIBP23284 216 aaKnown RBP17.05■□□□□ 0.32
CCM2-207ENST00000475551 SOX3P41225 446 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 PTCHD4Q6ZW05 846 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SYT12Q8IV01 421 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 BBS7Q8IWZ6 715 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 CREB3L4Q8TEY5 395 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 TRMT61AQ96FX7 289 aaKnown RBP17.05■□□□□ 0.32
CCM2-207ENST00000475551 SPATA17Q96L03 361 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SLC25A19Q9HC21 320 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 SRRDQ9UH36 339 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 PRSS21Q9Y6M0 314 aa17.05■□□□□ 0.32
CCM2-207ENST00000475551 TMCC2O75069 709 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 OR2B3O76000 313 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 ZNF30P17039 623 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 AQP1P29972 269 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 HOXC5Q00444 222 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.04■□□□□ 0.32
CCM2-207ENST00000475551 IFI44LQ53G44 452 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 CDKL4Q5MAI5 379 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 C10orf120Q5SQS8 335 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 PLET1Q6UQ28 207 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 PAMR1Q6UXH9 720 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 C1orf52Q8N6N3 182 aaKnown RBP17.04■□□□□ 0.32
CCM2-207ENST00000475551 OR9Q2Q8NGE9 314 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 ZC3HAV1LQ96H79 300 aaKnown RBP17.04■□□□□ 0.32
CCM2-207ENST00000475551 UCK2Q9BZX2 261 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 FZD3Q9NPG1 666 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 NDUFB11Q9NX14 153 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 FTSJ1Q9UET6 329 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 FADS2P1A8MWK0 482 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 CSO75390 466 aaKnown RBP17.04■□□□□ 0.32
CCM2-207ENST00000475551 IL1AP01583 271 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 GPC1P35052 558 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 C21orf58P58505 322 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 RGNQ15493 299 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 SPHARQ15513 63 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 TATDN3Q17R31 274 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 BTBD16Q32M84 506 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 ZNF648Q5T619 568 aaPredicted RBP17.04■□□□□ 0.32
CCM2-207ENST00000475551 LRRC70Q7Z2Q7 622 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 DDX53Q86TM3 631 aaKnown RBP17.04■□□□□ 0.32
CCM2-207ENST00000475551 CLDN22Q8N7P3 220 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 C11orf65Q8NCR3 313 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 VPS35Q96QK1 796 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 THSD1Q9NS62 852 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 SSR3Q9UNL2 185 aa17.04■□□□□ 0.32
CCM2-207ENST00000475551 TEX51A0A1B0GUA7 166 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 C1orf226A1L170 272 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 LEUTXA8MZ59 168 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 YY2O15391 372 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 PROM1O43490 865 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 CYP2A6P11509 494 aaPredicted RBP17.03■□□□□ 0.32
CCM2-207ENST00000475551 HMGCLP35914 325 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 TGM4P49221 684 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 MRPS6P82932 125 aaKnown RBP17.03■□□□□ 0.32
CCM2-207ENST00000475551 MEDAGQ5VYS4 303 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 HSDL2Q6YN16 418 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 LSMEM1Q8N8F7 131 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 L3MBTL4Q8NA19 623 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 NLGN4YQ8NFZ3 816 aaPredicted RBP17.03■□□□□ 0.32
CCM2-207ENST00000475551 MAL2Q969L2 176 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 EID2BQ96D98 161 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 DIRAS2Q96HU8 199 aa17.03■□□□□ 0.32
CCM2-207ENST00000475551 KATNAL1Q9BW62 490 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms