RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 YOD1Q5VVQ6 348 aaPredicted RBP14.88□□□□□ -0.03
CPSF3-203ENST00000475482 METTL21CQ5VZV1 264 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 CPZQ66K79 652 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 CAPN13Q6MZZ7 669 aaPredicted RBP14.88□□□□□ -0.03
CPSF3-203ENST00000475482 EPGNQ6UW88 154 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 TRPM8Q7Z2W7 1104 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 MILR1Q7Z6M3 343 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 SNX31Q8N9S9 440 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 CCT6BQ92526 530 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 MOCOSQ96EN8 888 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 NSUN5Q96P11 429 aaKnown RBP14.88□□□□□ -0.03
CPSF3-203ENST00000475482 NDC1Q9BTX1 674 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 NTMT1Q9BV86 223 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 ACSS2Q9NR19 701 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 PADI2Q9Y2J8 665 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 NUP210LQ5VU65 1888 aa14.88□□□□□ -0.03
CPSF3-203ENST00000475482 RP1L1Q8IWN7 2480 aaPredicted RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 DOCK10Q96BY6 2186 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 OR2A25A4D2G3 310 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 CCT8L1PA6NM43 557 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 UBFD1O14562 309 aaKnown RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 SRPX2O60687 465 aaPredicted RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 UGDHO60701 494 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 VPS4BO75351 444 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 SLC16A8O95907 504 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 ARSFP54793 590 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 SSPNQ14714 243 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 NKAIN1Q4KMZ8 207 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 FBXO48Q5FWF7 155 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 TCTE1Q5JU00 501 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 C1orf189Q5VU69 101 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 MBOAT1Q6ZNC8 495 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 RPS27LQ71UM5 84 aaKnown RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 RNF44Q7L0R7 432 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 LRRC56Q8IYG6 542 aaPredicted RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 TMEM102Q8N9M5 508 aaPredicted RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 OR2Y1Q8NGV0 311 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 OR56A3Q8NH54 315 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 ESAMQ96AP7 390 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 MIPEPQ99797 713 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 CCDC28BQ9BUN5 200 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 ZBTB26Q9HCK0 441 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 GPRC5BQ9NZH0 403 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 HEY2Q9UBP5 337 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 TRPS1Q9UHF7 1281 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 FLNCQ14315 2725 aa14.87□□□□□ -0.03
CPSF3-203ENST00000475482 SETXQ7Z333 2677 aaKnown RBP14.87□□□□□ -0.03
CPSF3-203ENST00000475482 GOLGA8QA0A0J9YX86 632 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 A0A1B0GX78 115 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 GOLGA8OA6NCC3 632 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 ARGFXA6NJG6 315 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 GOLGA8NF8WBI6 632 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 CLGNO14967 610 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 ZIC2O95409 532 aaPredicted RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 CLDN9O95484 217 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 TSPAN8P19075 237 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 IMPA1P29218 277 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 HMOX2P30519 316 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 GDF5P43026 501 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 IDH3AP50213 366 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 PNLIPRP1P54315 467 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 YBX1P67809 324 aaKnown RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 KCNC4Q03721 635 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 IFT88Q13099 833 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 NAE1Q13564 534 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 GRM7Q14831 915 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 PDCD2Q16342 344 aaPredicted RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 C18orf21Q32NC0 220 aaPredicted RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 SPDYAQ5MJ70 313 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 KANK2Q63ZY3 851 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 FBXO42Q6P3S6 717 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 ASB18Q6ZVZ8 466 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 MED25Q71SY5 747 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 THOC6Q86W42 341 aaKnown RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 SMPDL3AQ92484 453 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 IP6K3Q96PC2 410 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 SLC29A3Q9BZD2 475 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 NUF2Q9BZD4 464 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 TRIM4Q9C037 500 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 PCBD2Q9H0N5 130 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 ATG10Q9H0Y0 220 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 SLC26A1Q9H2B4 701 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 CLMPQ9H6B4 373 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 ACTR8Q9H981 624 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 MEAF6Q9HAF1 191 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 TCF7L2Q9NQB0 619 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 CCDC177Q9NQR7 707 aaPredicted RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 TXLNGQ9NUQ3 528 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 IFT80Q9P2H3 777 aaPredicted RBP14.86□□□□□ -0.03
CPSF3-203ENST00000475482 FIS1Q9Y3D6 152 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 PCDHGB7Q9Y5F8 929 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 KCNE2Q9Y6J6 123 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 RELNP78509 3460 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 CNTRLQ7Z7A1 2325 aa14.86□□□□□ -0.03
CPSF3-203ENST00000475482 IGKV1-8A0A0C4DH67 115 aa14.85□□□□□ -0.03
CPSF3-203ENST00000475482 ERICH4A6NGS2 130 aa14.85□□□□□ -0.03
CPSF3-203ENST00000475482 E7ENX8 843 aa14.85□□□□□ -0.03
CPSF3-203ENST00000475482 OR7A17O14581 309 aa14.85□□□□□ -0.03
CPSF3-203ENST00000475482 ZNF195O14628 629 aa14.85□□□□□ -0.03
CPSF3-203ENST00000475482 DSCR3O14972 297 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms