RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 ERICH5Q6P6B1 374 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NPSR1Q6W5P4 371 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 UTS2BQ765I0 119 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SLITRK4Q8IW52 837 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ABI1Q8IZP0 508 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 LRRC52Q8N7C0 313 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CLRN3Q8NCR9 226 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 SLAIN1Q8ND83 568 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 OR8D4Q8NGM9 314 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ENKURQ8TC29 256 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ASB13Q8WXK3 278 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ST8SIA4Q92187 359 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TM9SF4Q92544 642 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 RORBQ92753 470 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 ITCHQ96J02 903 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 QRFPRQ96P65 431 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TAAR1Q96RJ0 339 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 KCNA7Q96RP8 456 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NEU1Q99519 415 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 AARSD1Q9BTE6 412 aaKnown RBP3.94□□□□□ -1.78
USP16-205ENST00000474835 TEX13BQ9BXU2 312 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PRDM9Q9NQV7 894 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TOR4AQ9NXH8 423 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 NDUFAF4Q9P032 175 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 GIMAP2Q9UG22 337 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 PHF11Q9UIL8 331 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 TSPAN16Q9UKR8 245 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 OGDHLQ9ULD0 1010 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 CMAHPQ9Y471 501 aa3.94□□□□□ -1.78
USP16-205ENST00000474835 DNAJC25-GNG10A0A024R161 153 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PNMA8CA0A1B0GUJ8 204 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MEX3AA1L020 520 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 LRRC14BA6NHZ5 514 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 HEPACAM2A8MVW5 462 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 NEMP1O14524 444 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MYL12BO14950 172 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 NOBOXO60393 691 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CCNDBP1O95273 360 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 S100BP04271 92 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 HLA-DOAP06340 250 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TIMP2P16035 220 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ATF6P18850 670 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MYL12AP19105 171 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TNNI3P19429 210 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 OGNP20774 298 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 FMO3P31513 532 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 BDKRB1P46663 353 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TPMTP51580 245 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 EFNA5P52803 228 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CYP4F2P78329 520 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 BDH1Q02338 343 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CYP4F3Q08477 520 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ITKQ08881 620 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ELP6Q0PNE2 266 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PDE7AQ13946 482 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ZNF169Q14929 603 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 UGP2Q16851 508 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TIGD6Q17RP2 521 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 AP5B1Q2VPB7 878 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TCTE1Q5JU00 501 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SPOUT1Q5T280 376 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 C10orf62Q5T681 223 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 OR2T5Q6IEZ7 315 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 LIN54Q6MZP7 749 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PSAPL1Q6NUJ1 521 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 FUT10Q6P4F1 479 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PLPPR4Q7Z2D5 763 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SLC36A1Q7Z2H8 476 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SLC9B2Q86UD5 537 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SLC43A2Q8N370 569 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 OR8J2Q8NGG1 315 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 OR6M1Q8NGM8 313 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 OR2T29Q8NH02 315 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 OR51Q1Q8NH59 317 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MRPL38Q96DV4 380 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 ASIC4Q96FT7 647 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ZNF764Q96H86 408 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 H2AFJQ9BTM1 129 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 DGCR6LQ9BY27 220 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PITHD1Q9GZP4 211 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 GAREM1Q9H706 876 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ACTR8Q9H981 624 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MYOZ1Q9NP98 299 aaPredicted RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 IFT46Q9NQC8 304 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 GPATCH2LQ9NWQ4 482 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 MCUBQ9NWR8 336 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 ERVK13-1Q9NX77 482 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SRP68Q9UHB9 627 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 ACSL5Q9ULC5 683 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 COPS3Q9UNS2 423 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 SAMD4AQ9UPU9 718 aaKnown RBP3.93□□□□□ -1.78
USP16-205ENST00000474835 MTMR7Q9Y216 660 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PTPRSQ13332 1948 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 KRBOX1C9JBD0 128 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PTGES3LE9PB15 166 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 H3BUI4 141 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 CXCR6O00574 342 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 TSPAN3O60637 253 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 PEX14O75381 377 aa3.93□□□□□ -1.78
USP16-205ENST00000474835 OR2B3O76000 313 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms