RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CNOT10Q9H9A5 744 aaKnown RBP19.12■□□□□ 0.65
PDLIM4-206ENST00000474421 ITPR2Q14571 2701 aa19.12■□□□□ 0.65
PDLIM4-206ENST00000474421 UNC5CO95185 931 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 C1GALT1C1LP0DN25 315 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 HPDP32754 393 aaPredicted RBP19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CD96P40200 585 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 HNF4AP41235 474 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 SLC6A12P48065 614 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 OR1C1Q15619 314 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 TOR1AIP1Q5JTV8 583 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CDKL4Q5MAI5 379 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 C1QL3Q5VWW1 255 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 ZNF787Q6DD87 383 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CAPN12Q6ZSI9 719 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CYS1Q717R9 158 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 KRT78Q8N1N4 520 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 TMEM178AQ8NBL3 297 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 MDS2Q8NDY4 140 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 ELP5Q8TE02 316 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CREB3L4Q8TEY5 395 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 FAR2Q96K12 515 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CPNE1Q99829 537 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 SAYSD1Q9NPB0 183 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 PRDM9Q9NQV7 894 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 GPRC5BQ9NZH0 403 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 SUCOQ9UBS9 1254 aaKnown RBP19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CELSR2Q9HCU4 2923 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 CROCCQ5TZA2 2017 aa19.11■□□□□ 0.65
PDLIM4-206ENST00000474421 A0A088AWK7 358 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 GABRR3A8MPY1 467 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 ZG16O60844 167 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 DNAJB6O75190 326 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 B3GALT4O96024 378 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 ZNF10P21506 573 aaPredicted RBP19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 MST1P26927 711 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 EEF1DP29692 281 aaKnown RBP19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 OC90Q02509 493 aaPredicted RBP19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 HYAL2Q12891 473 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 TGFBIQ15582 683 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 MTFR2Q6P444 385 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 TMIGD1Q6UXZ0 262 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 SLCO4C1Q6ZQN7 724 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 CYP4X1Q8N118 509 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 GAL3ST3Q96A11 431 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 NPAS2Q99743 824 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 KLHL31Q9H511 634 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 NT5DC2Q9H857 520 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 PYCARDQ9ULZ3 195 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 MMACHCQ9Y4U1 282 aa19.1■□□□□ 0.65
PDLIM4-206ENST00000474421 TCRBV16S1A1N1A0A5B0 115 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SAGE2PA6NJ88 616 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 GSTA2P09210 222 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SSTR1P30872 391 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 CASP6P55212 293 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 ATP6V0D1P61421 351 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 RPS19BP1Q86WX3 136 aaKnown RBP19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 GPSM1Q86YR5 675 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 FAM98AQ8NCA5 519 aaKnown RBP19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SPATA4Q8NEY3 305 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SCMH1Q96GD3 660 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SIGLEC12Q96PQ1 595 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 NPLQ9BXD5 320 aaPredicted RBP19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 DPH5Q9H2P9 285 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 EHD1Q9H4M9 534 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 CDCP1Q9H5V8 836 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 SMYD2Q9NRG4 433 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 WWOXQ9NZC7 414 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 COPG2Q9UBF2 871 aa19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 MTO1Q9Y2Z2 717 aaKnown RBP19.09■□□□□ 0.65
PDLIM4-206ENST00000474421 IGKV3D-11A0A0A0MRZ8 115 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 TRGV8A0A0C4DH27 118 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 CTAGE15A4D2H0 777 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 NCF1BA6NI72 391 aaPredicted RBP19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 NCF1CA8MVU1 366 aaPredicted RBP19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 CLGNO14967 610 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 WISP3O95389 354 aaPredicted RBP19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 CCDC166P0CW27 439 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 NCF1P14598 390 aaPredicted RBP19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 STMN1P16949 149 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 GGT5P36269 586 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 GP5P40197 560 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 GDF5P43026 501 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 BTN3A2P78410 334 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 BTG2P78543 158 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 SLBPQ14493 270 aaKnown RBP eCLIP19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 KRTCAP3Q53RY4 240 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 SULT1C3Q6IMI6 304 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 CTAGE6Q86UF2 777 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 CA13Q8N1Q1 262 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 ADAMTS18Q8TE60 1221 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 GPR22Q99680 433 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 RBBP8Q99708 897 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 PHACTR1Q9C0D0 580 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 RHBGQ9H310 441 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 KLHL1Q9NR64 748 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 DNAJC11Q9NVH1 559 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 ANKRD10Q9NXR5 420 aa19.08■□□□□ 0.64
PDLIM4-206ENST00000474421 TCRBV9S1A1TA0A576 114 aa19.07■□□□□ 0.64
PDLIM4-206ENST00000474421 LRIT2A6NDA9 550 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms