RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 OR51B5Q9H339 312 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 ELOVL6Q9H5J4 265 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 TNFRSF12AQ9NP84 129 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 FARSBQ9NSD9 589 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 SNX6Q9UNH7 406 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 FARSAQ9Y285 508 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 TIMM22Q9Y584 194 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 MRPS18BQ9Y676 258 aaKnown RBP17.2■□□□□ 0.34
SNRPB-203ENST00000474384 CFAP47Q6ZTR5 3102 aa17.2■□□□□ 0.34
SNRPB-203ENST00000474384 ZFHX4Q86UP3 3567 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 A0A087WV48 116 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 ZNF860A6NHJ4 632 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 HMGB1P1B2RPK0 211 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 C21orf140B9A014 251 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 H0YIG0 161 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 SAP18O00422 153 aaKnown RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 EFSO43281 561 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 GALR3O60755 368 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 KLHL18O94889 574 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 RAB40ALP0C0E4 278 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 WT1P19544 449 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 PTX3P26022 381 aaPredicted RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 HMOX2P30519 316 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 PLA2G16P53816 162 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 FOXA1P55317 472 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 RPS15P62841 145 aaKnown RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 MAT1AQ00266 395 aaKnown RBP17.19■□□□□ 0.34
SNRPB-203ENST00000474384 TLE3Q04726 772 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 DSG2Q14126 1118 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 NCF4Q15080 339 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 CHI3L2Q15782 390 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 SYT16Q17RD7 645 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 DEPDC1Q5TB30 811 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 FAM69BQ5VUD6 431 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 CHSY3Q70JA7 882 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 OVCH1Q7RTY7 1134 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 AMER3Q8N944 861 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 OR2L5Q8NG80 312 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 OR6Y1Q8NGX8 325 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 PPP1R14CQ8TAE6 165 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 FAR2Q96K12 515 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 C17orf62Q9BQA9 187 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 TRMOQ9BU70 441 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 GPR87Q9BY21 358 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 SLC29A3Q9BZD2 475 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 SSUH2Q9Y2M2 353 aa17.19■□□□□ 0.34
SNRPB-203ENST00000474384 FOXE1O00358 373 aaPredicted RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 MANBAO00462 879 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 CNOT3O75175 753 aaKnown RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 DNAJB6O75190 326 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 RDH16O75452 317 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 ETHE1O95571 254 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 PDYNP01213 254 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 KRT6AP02538 564 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 KRT6BP04259 564 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 ENO1P06733 434 aaKnown RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 CHRNGP07510 517 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 NEFHP12036 1026 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 BGNP21810 368 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 KRT6CP48668 564 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 FOXL2P58012 376 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 RPS18P62269 152 aaKnown RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 BTN3A2P78410 334 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 RCN2Q14257 317 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 TMEM35AQ53FP2 167 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 ARL13AQ5H913 290 aaPredicted RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 BROXQ5VW32 411 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 KHDRBS2Q5VWX1 349 aaKnown RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 CES4AQ5XG92 561 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 MRPL14Q6P1L8 145 aaKnown RBP17.18■□□□□ 0.34
SNRPB-203ENST00000474384 TRIM40Q6P9F5 258 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 ABHD17CQ6PCB6 329 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 UBE3DQ7Z6J8 389 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 CUZD1Q86UP6 607 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 SHISA5Q8N114 240 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 SELENOMQ8WWX9 145 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 EFHD1Q9BUP0 239 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 HCN3Q9P1Z3 774 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 TRPC4Q9UBN4 977 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 CTSFQ9UBX1 484 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 KCND3Q9UK17 655 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 PCDHGA6Q9Y5G7 932 aa17.18■□□□□ 0.34
SNRPB-203ENST00000474384 SRRM3A6NNA2 597 aaPredicted RBP17.17■□□□□ 0.34
SNRPB-203ENST00000474384 H3BQF6 201 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 RTCAO00442 366 aaKnown RBP17.17■□□□□ 0.34
SNRPB-203ENST00000474384 ULK1O75385 1050 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 CRCPO75575 148 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 ALBP02768 609 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 PTPN4P29074 926 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 SERPINB3P29508 390 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 ARRB2P32121 409 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 MAP1BP46821 2468 aaKnown RBP17.17■□□□□ 0.34
SNRPB-203ENST00000474384 HTR6P50406 440 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 OLR1P78380 273 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 TGM3Q08188 693 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 NKG7Q16617 165 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 C10orf62Q5T681 223 aaPredicted RBP17.17■□□□□ 0.34
SNRPB-203ENST00000474384 ATG14Q6ZNE5 492 aa17.17■□□□□ 0.34
SNRPB-203ENST00000474384 TMEM151BQ8IW70 566 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms