RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 C1orf105O95561 183 aa19.05■□□□□ 0.64
APP-215ENST00000474136 PKMP14618 531 aaKnown RBP19.05■□□□□ 0.64
APP-215ENST00000474136 HOXB4P17483 251 aaPredicted RBP19.05■□□□□ 0.64
APP-215ENST00000474136 SERPINB8P50452 374 aa19.05■□□□□ 0.64
APP-215ENST00000474136 ART1P52961 327 aa19.05■□□□□ 0.64
APP-215ENST00000474136 TUBA3CQ13748 450 aa19.05■□□□□ 0.64
APP-215ENST00000474136 TNFAIP8L3Q5GJ75 292 aa19.05■□□□□ 0.64
APP-215ENST00000474136 TUBA3EQ6PEY2 450 aa19.05■□□□□ 0.64
APP-215ENST00000474136 TTC23LQ6PF05 361 aa19.05■□□□□ 0.64
APP-215ENST00000474136 CSNK1A1LQ8N752 337 aa19.05■□□□□ 0.64
APP-215ENST00000474136 MDS2Q8NDY4 140 aa19.05■□□□□ 0.64
APP-215ENST00000474136 HMGCLL1Q8TB92 370 aa19.05■□□□□ 0.64
APP-215ENST00000474136 ALKBH8Q96BT7 664 aaKnown RBP19.05■□□□□ 0.64
APP-215ENST00000474136 SDCCAG3Q96C92 435 aa19.05■□□□□ 0.64
APP-215ENST00000474136 ATP6V1G3Q96LB4 118 aa19.05■□□□□ 0.64
APP-215ENST00000474136 TREX2Q9BQ50 279 aaPredicted RBP19.05■□□□□ 0.64
APP-215ENST00000474136 P2RY12Q9H244 342 aa19.05■□□□□ 0.64
APP-215ENST00000474136 POPDC3Q9HBV1 291 aa19.05■□□□□ 0.64
APP-215ENST00000474136 TAS2R13Q9NYV9 303 aa19.05■□□□□ 0.64
APP-215ENST00000474136 CTNNAL1Q9UBT7 734 aa19.05■□□□□ 0.64
APP-215ENST00000474136 FAM95CA0A1B0GW59 222 aa19.04■□□□□ 0.64
APP-215ENST00000474136 ADAM10O14672 748 aa19.04■□□□□ 0.64
APP-215ENST00000474136 PRPF4O43172 522 aaKnown RBP eCLIP19.04■□□□□ 0.64
APP-215ENST00000474136 C8orf89P0DMQ9 161 aa19.04■□□□□ 0.64
APP-215ENST00000474136 ABOP16442 354 aa19.04■□□□□ 0.64
APP-215ENST00000474136 STMN1P16949 149 aa19.04■□□□□ 0.64
APP-215ENST00000474136 CRABP2P29373 138 aa19.04■□□□□ 0.64
APP-215ENST00000474136 TYK2P29597 1187 aa19.04■□□□□ 0.64
APP-215ENST00000474136 EMP3P54852 163 aa19.04■□□□□ 0.64
APP-215ENST00000474136 AP2B1P63010 937 aa19.04■□□□□ 0.64
APP-215ENST00000474136 SNRPNP63162 240 aaKnown RBP19.04■□□□□ 0.64
APP-215ENST00000474136 USP10Q14694 798 aaKnown RBP19.04■□□□□ 0.64
APP-215ENST00000474136 ACER2Q5QJU3 275 aa19.04■□□□□ 0.64
APP-215ENST00000474136 PTRHD1Q6GMV3 140 aaKnown RBP19.04■□□□□ 0.64
APP-215ENST00000474136 LANCL3Q6ZV70 420 aa19.04■□□□□ 0.64
APP-215ENST00000474136 DOLPP1Q86YN1 238 aa19.04■□□□□ 0.64
APP-215ENST00000474136 SIAH3Q8IW03 269 aa19.04■□□□□ 0.64
APP-215ENST00000474136 CHERPQ8IWX8 916 aaKnown RBP19.04■□□□□ 0.64
APP-215ENST00000474136 GPATCH11Q8N954 259 aa19.04■□□□□ 0.64
APP-215ENST00000474136 SKA2Q8WVK7 121 aaPredicted RBP19.04■□□□□ 0.64
APP-215ENST00000474136 ISL2Q96A47 359 aa19.04■□□□□ 0.64
APP-215ENST00000474136 MVB12AQ96EY5 273 aa19.04■□□□□ 0.64
APP-215ENST00000474136 FRMD6Q96NE9 622 aa19.04■□□□□ 0.64
APP-215ENST00000474136 PANX3Q96QZ0 392 aa19.04■□□□□ 0.64
APP-215ENST00000474136 AARSD1Q9BTE6 412 aaKnown RBP19.04■□□□□ 0.64
APP-215ENST00000474136 MTO1Q9Y2Z2 717 aaKnown RBP19.04■□□□□ 0.64
APP-215ENST00000474136 PCDHGB6Q9Y5F9 930 aa19.04■□□□□ 0.64
APP-215ENST00000474136 ASPDHA6ND91 283 aa19.03■□□□□ 0.64
APP-215ENST00000474136 KPNA5O15131 536 aa19.03■□□□□ 0.64
APP-215ENST00000474136 MAN1A2O60476 641 aa19.03■□□□□ 0.64
APP-215ENST00000474136 VPS26AO75436 327 aa19.03■□□□□ 0.64
APP-215ENST00000474136 ANXA5P08758 320 aa19.03■□□□□ 0.64
APP-215ENST00000474136 FMO4P31512 558 aa19.03■□□□□ 0.64
APP-215ENST00000474136 CD96P40200 585 aa19.03■□□□□ 0.64
APP-215ENST00000474136 OR1C1Q15619 314 aa19.03■□□□□ 0.64
APP-215ENST00000474136 BTBD16Q32M84 506 aa19.03■□□□□ 0.64
APP-215ENST00000474136 SPINK14Q6IE38 97 aa19.03■□□□□ 0.64
APP-215ENST00000474136 MTERF4Q7Z6M4 381 aaKnown RBP19.03■□□□□ 0.64
APP-215ENST00000474136 TRABD2AQ86V40 505 aa19.03■□□□□ 0.64
APP-215ENST00000474136 LCA5Q86VQ0 697 aa19.03■□□□□ 0.64
APP-215ENST00000474136 ARHGEF39Q8N4T4 335 aa19.03■□□□□ 0.64
APP-215ENST00000474136 CA5BP1Q8WTZ4 195 aa19.03■□□□□ 0.64
APP-215ENST00000474136 KCNJ9Q92806 393 aa19.03■□□□□ 0.64
APP-215ENST00000474136 BIRC8Q96P09 236 aa19.03■□□□□ 0.64
APP-215ENST00000474136 DMRTA2Q96SC8 542 aa19.03■□□□□ 0.64
APP-215ENST00000474136 NPAS2Q99743 824 aa19.03■□□□□ 0.64
APP-215ENST00000474136 VN1R1Q9GZP7 353 aa19.03■□□□□ 0.64
APP-215ENST00000474136 KLHL42Q9P2K6 505 aa19.03■□□□□ 0.64
APP-215ENST00000474136 TSR3Q9UJK0 312 aaKnown RBP19.03■□□□□ 0.64
APP-215ENST00000474136 NIPBLQ6KC79 2804 aaeCLIP19.03■□□□□ 0.64
APP-215ENST00000474136 HMX2A2RU54 273 aa19.02■□□□□ 0.64
APP-215ENST00000474136 E5RI56 91 aa19.02■□□□□ 0.64
APP-215ENST00000474136 ASNA1O43681 348 aa19.02■□□□□ 0.64
APP-215ENST00000474136 MLYCDO95822 493 aa19.02■□□□□ 0.64
APP-215ENST00000474136 SYF2O95926 243 aaKnown RBP19.02■□□□□ 0.64
APP-215ENST00000474136 EEF1DP29692 281 aaKnown RBP19.02■□□□□ 0.64
APP-215ENST00000474136 CMPK1P30085 196 aa19.02■□□□□ 0.64
APP-215ENST00000474136 RAB10P61026 200 aa19.02■□□□□ 0.64
APP-215ENST00000474136 HECTD2Q5U5R9 776 aa19.02■□□□□ 0.64
APP-215ENST00000474136 FGD2Q7Z6J4 655 aa19.02■□□□□ 0.64
APP-215ENST00000474136 CRLF3Q8IUI8 442 aa19.02■□□□□ 0.64
APP-215ENST00000474136 CYP4X1Q8N118 509 aa19.02■□□□□ 0.64
APP-215ENST00000474136 MZB1Q8WU39 189 aa19.02■□□□□ 0.64
APP-215ENST00000474136 PHF10Q8WUB8 498 aaKnown RBP19.02■□□□□ 0.64
APP-215ENST00000474136 SCMH1Q96GD3 660 aa19.02■□□□□ 0.64
APP-215ENST00000474136 ZNF354BQ96LW1 612 aa19.02■□□□□ 0.64
APP-215ENST00000474136 SMC6Q96SB8 1091 aa19.02■□□□□ 0.64
APP-215ENST00000474136 PLCD4Q9BRC7 762 aa19.02■□□□□ 0.64
APP-215ENST00000474136 SSU72Q9NP77 194 aaKnown RBP19.02■□□□□ 0.64
APP-215ENST00000474136 PPT2Q9UMR5 302 aa19.02■□□□□ 0.64
APP-215ENST00000474136 ZNF469Q96JG9 3925 aaPredicted RBP19.02■□□□□ 0.64
APP-215ENST00000474136 IGKV1-8A0A0C4DH67 115 aa19.01■□□□□ 0.63
APP-215ENST00000474136 OR2W5A6NFC9 320 aa19.01■□□□□ 0.63
APP-215ENST00000474136 P2RX6O15547 441 aa19.01■□□□□ 0.63
APP-215ENST00000474136 COL6A2P12110 1019 aa19.01■□□□□ 0.63
APP-215ENST00000474136 BMPR2Q13873 1038 aa19.01■□□□□ 0.63
APP-215ENST00000474136 PLAG1Q6DJT9 500 aa19.01■□□□□ 0.63
APP-215ENST00000474136 H3F3CQ6NXT2 135 aa19.01■□□□□ 0.63
APP-215ENST00000474136 SUSD1Q6UWL2 747 aa19.01■□□□□ 0.63
APP-215ENST00000474136 GALNTL5Q7Z4T8 443 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms