RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 NFAM1Q8NET5 270 aaPredicted RBP12.54□□□□□ -0.4
COPS7B-219ENST00000474042 UTP15Q8TED0 518 aaKnown RBP12.54□□□□□ -0.4
COPS7B-219ENST00000474042 SLC5A11Q8WWX8 675 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 ATL1Q8WXF7 558 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 SMIM10Q96HG1 83 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 DMRTA2Q96SC8 542 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 NAT9Q9BTE0 207 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 IKZF3Q9UKT9 509 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 ASB1Q9Y576 335 aa12.54□□□□□ -0.4
COPS7B-219ENST00000474042 POLQO75417 2590 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 ADGRG4Q8IZF6 3080 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PABPN1LA6NDY0 278 aaKnown RBP12.53□□□□□ -0.4
COPS7B-219ENST00000474042 C4orf51C9J302 202 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 DNALI1O14645 258 aaPredicted RBP12.53□□□□□ -0.4
COPS7B-219ENST00000474042 ADAM10O14672 748 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PRMT3O60678 531 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 B4GALT2O60909 372 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 RNH1P13489 461 aaKnown RBP12.53□□□□□ -0.4
COPS7B-219ENST00000474042 ABOP16442 354 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PGGT1BP53609 377 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 BTG2P78543 158 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 MAPKAPK3Q16644 382 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 TEDDM1Q5T9Z0 273 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 HECTD2Q5U5R9 776 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 FAM45BPQ6NSW5 357 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 DOLPP1Q86YN1 238 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 IGDCC3Q8IVU1 814 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 CPSF7Q8N684 471 aaKnown RBP12.53□□□□□ -0.4
COPS7B-219ENST00000474042 FAM45AQ8TCE6 357 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 ACTRT1Q8TDG2 376 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 AGAP11Q8TF27 550 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PDLIM5Q96HC4 596 aaKnown RBP12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PTCHD1Q96NR3 888 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 WDR83Q9BRX9 315 aaKnown RBP12.53□□□□□ -0.4
COPS7B-219ENST00000474042 TRIM54Q9BYV2 358 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 AICDAQ9GZX7 198 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PELI2Q9HAT8 420 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 GPAMQ9HCL2 828 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 PRDM9Q9NQV7 894 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 CCDC168Q8NDH2 2452 aa12.53□□□□□ -0.4
COPS7B-219ENST00000474042 E9PLN8 166 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 ZNHIT1O43257 154 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 GUCA1CO95843 209 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 SERPIND1P05546 499 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 MAOAP21397 527 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 SSTR2P30874 369 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 KIR3DL1P43629 444 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 CYB561P49447 251 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 HLCSP50747 726 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 ITGA8P53708 1063 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 CSHL1Q14406 222 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 TMPRSS11BQ86T26 416 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 GPATCH11Q8N954 259 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 POGLUT1Q8NBL1 392 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 APCDD1LQ8NCL9 501 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 CREB3L4Q8TEY5 395 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 SLCO2A1Q92959 643 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 C14orf79Q96F83 325 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 TSNARE1Q96NA8 513 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 OSBPL9Q96SU4 736 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 TREX2Q9BQ50 279 aaPredicted RBP12.52□□□□□ -0.41
COPS7B-219ENST00000474042 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 NECTIN3Q9NQS3 549 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 ASIC3Q9UHC3 531 aa12.52□□□□□ -0.41
COPS7B-219ENST00000474042 KLF13Q9Y2Y9 288 aaPredicted RBP12.52□□□□□ -0.41
COPS7B-219ENST00000474042 CELSR1Q9NYQ6 3014 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 GOLGA6L10A0A0M3HER8 536 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 URADA6NGE7 173 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 FCHO1O14526 889 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 NRDCO43847 1150 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 SERPINA6P08185 405 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 ZNF37AP17032 561 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-219ENST00000474042 IVDP26440 423 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 PTGER1P34995 402 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 RAB8AP61006 207 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 TERF2Q15554 542 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 STEAP4Q687X5 459 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 TRMT10BQ6PF06 316 aaKnown RBP12.51□□□□□ -0.41
COPS7B-219ENST00000474042 NXPE4Q6UWF7 544 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 THOC6Q86W42 341 aaKnown RBP12.51□□□□□ -0.41
COPS7B-219ENST00000474042 SCUBE1Q8IWY4 988 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 CYP4X1Q8N118 509 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 CA13Q8N1Q1 262 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 TRPV3Q8NET8 790 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 TMEM125Q96AQ2 219 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 SPOCK3Q9BQ16 436 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 AIF1LQ9BQI0 150 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 ENKD1Q9H0I2 346 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 KLHL31Q9H511 634 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 ZFATQ9P243 1243 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 ZNF223Q9UK11 482 aaPredicted RBP12.51□□□□□ -0.41
COPS7B-219ENST00000474042 PPIEQ9UNP9 301 aaKnown RBP12.51□□□□□ -0.41
COPS7B-219ENST00000474042 VWA7Q9Y334 891 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 MMACHCQ9Y4U1 282 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 C2CD3Q4AC94 2353 aa12.51□□□□□ -0.41
COPS7B-219ENST00000474042 HCFC1P51610 2035 aa12.5□□□□□ -0.41
COPS7B-219ENST00000474042 PSMD12O00232 456 aaPredicted RBP12.5□□□□□ -0.41
COPS7B-219ENST00000474042 CES2O00748 559 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms