RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
USF1-205ENST00000473969 B3GALT2O43825 422 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 DLX3O60479 287 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 KLHL41O60662 606 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 BMP10O95393 424 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 MLYCDO95822 493 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 TGFB1P01137 390 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 RPS17P08708 135 aaKnown RBP13.01□□□□□ -0.33
USF1-205ENST00000473969 SBK3P0C264 359 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 IMPDH1P20839 514 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 JAK1P23458 1154 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 RAP1GDS1P52306 607 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 PLA2G16P53816 162 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 FOXL2P58012 376 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 CLCQ05315 142 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 IFT88Q13099 833 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 KCNAB2Q13303 367 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 E2F2Q14209 437 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 LY6DQ14210 128 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 RCN2Q14257 317 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 TMEM35AQ53FP2 167 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 IRAK1BP1Q5VVH5 260 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 PDSS2Q86YH6 399 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 SRRM1Q8IYB3 904 aaKnown RBP13.01□□□□□ -0.33
USF1-205ENST00000473969 LAS2Q8IYD9 372 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 TMEM151AQ8N4L1 468 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 L3MBTL4Q8NA19 623 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 OR2L5Q8NG80 312 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 OR7G3Q8NG95 312 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 RDH11Q8TC12 318 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 MS4A6EQ96DS6 147 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 PEX11GQ96HA9 241 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 OR1F2PQ96R84 312 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 NTMT1Q9BV86 223 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 TMEM109Q9BVC6 243 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 ATP13A2Q9NQ11 1180 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 C19orf25Q9UFG5 118 aaPredicted RBP13.01□□□□□ -0.33
USF1-205ENST00000473969 LGALS13Q9UHV8 139 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 TUBD1Q9UJT1 453 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 RNF11Q9Y3C5 154 aa13.01□□□□□ -0.33
USF1-205ENST00000473969 MDC1Q14676 2089 aaKnown RBP13.01□□□□□ -0.33
USF1-205ENST00000473969 FASNP49327 2511 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 H0YIV9 168 aa13□□□□□ -0.33
USF1-205ENST00000473969 CHST10O43529 356 aa13□□□□□ -0.33
USF1-205ENST00000473969 CYC1P08574 325 aa13□□□□□ -0.33
USF1-205ENST00000473969 MYZAPP0CAP1 466 aa13□□□□□ -0.33
USF1-205ENST00000473969 RNH1P13489 461 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 ACPPP15309 386 aa13□□□□□ -0.33
USF1-205ENST00000473969 PTX3P26022 381 aaPredicted RBP13□□□□□ -0.33
USF1-205ENST00000473969 HNRNPH1P31943 449 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 PIK3CBP42338 1070 aa13□□□□□ -0.33
USF1-205ENST00000473969 PRKAA2P54646 552 aa13□□□□□ -0.33
USF1-205ENST00000473969 CDH13P55290 713 aa13□□□□□ -0.33
USF1-205ENST00000473969 NAA20P61599 178 aa13□□□□□ -0.33
USF1-205ENST00000473969 SLC18A2Q05940 514 aa13□□□□□ -0.33
USF1-205ENST00000473969 HYAL2Q12891 473 aa13□□□□□ -0.33
USF1-205ENST00000473969 ZRSR2Q15696 482 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 AP5B1Q2VPB7 878 aa13□□□□□ -0.33
USF1-205ENST00000473969 TUBB8Q3ZCM7 444 aa13□□□□□ -0.33
USF1-205ENST00000473969 CFAP157Q5JU67 520 aa13□□□□□ -0.33
USF1-205ENST00000473969 ZNF678Q5SXM1 525 aa13□□□□□ -0.33
USF1-205ENST00000473969 C10orf62Q5T681 223 aaPredicted RBP13□□□□□ -0.33
USF1-205ENST00000473969 FAAH2Q6GMR7 532 aa13□□□□□ -0.33
USF1-205ENST00000473969 ZYG11AQ6WRX3 759 aa13□□□□□ -0.33
USF1-205ENST00000473969 PPP1R32Q7Z5V6 425 aa13□□□□□ -0.33
USF1-205ENST00000473969 TRABD2AQ86V40 505 aa13□□□□□ -0.33
USF1-205ENST00000473969 LAPTM4BQ86VI4 370 aa13□□□□□ -0.33
USF1-205ENST00000473969 ZC3H7AQ8IWR0 971 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 CCNYL1Q8N7R7 359 aa13□□□□□ -0.33
USF1-205ENST00000473969 OR5T3Q8NGG3 340 aa13□□□□□ -0.33
USF1-205ENST00000473969 HUS1BQ8NHY5 278 aa13□□□□□ -0.33
USF1-205ENST00000473969 TRPC4APQ8TEL6 797 aa13□□□□□ -0.33
USF1-205ENST00000473969 ZNF483Q8TF39 744 aaPredicted RBP13□□□□□ -0.33
USF1-205ENST00000473969 ZNF473Q8WTR7 871 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 SREK1Q8WXA9 508 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 TBC1D20Q96BZ9 403 aa13□□□□□ -0.33
USF1-205ENST00000473969 APOPT1Q96IL0 206 aa13□□□□□ -0.33
USF1-205ENST00000473969 NSUN5Q96P11 429 aaKnown RBP13□□□□□ -0.33
USF1-205ENST00000473969 KCNC2Q96PR1 638 aa13□□□□□ -0.33
USF1-205ENST00000473969 CDK15Q96Q40 435 aa13□□□□□ -0.33
USF1-205ENST00000473969 F2RL3Q96RI0 385 aa13□□□□□ -0.33
USF1-205ENST00000473969 SERINC2Q96SA4 455 aa13□□□□□ -0.33
USF1-205ENST00000473969 TBCDQ9BTW9 1192 aa13□□□□□ -0.33
USF1-205ENST00000473969 NPLQ9BXD5 320 aaPredicted RBP13□□□□□ -0.33
USF1-205ENST00000473969 C1QTNF3Q9BXJ4 246 aa13□□□□□ -0.33
USF1-205ENST00000473969 CENPHQ9H3R5 247 aa13□□□□□ -0.33
USF1-205ENST00000473969 ELOVL6Q9H5J4 265 aa13□□□□□ -0.33
USF1-205ENST00000473969 SENP1Q9P0U3 644 aa13□□□□□ -0.33
USF1-205ENST00000473969 SPACA6W5XKT8 324 aa13□□□□□ -0.33
USF1-205ENST00000473969 ZFYVE26Q68DK2 2539 aa13□□□□□ -0.33
USF1-205ENST00000473969 A0A0G2JN53 185 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 CCDC151A5D8V7 595 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 A6NL46 340 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 OR7A17O14581 309 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 PLIN3O60664 434 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 ALOX12BO75342 701 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 SH3BGRLO75368 114 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 B3GALT4O96024 378 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 PROCP04070 461 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 FHP07954 510 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms