RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SMAD5Q99717 465 aaKnown RBP17.87■□□□□ 0.45
PTCD3-210ENST00000473829 MRPL57Q9BQC6 102 aaKnown RBP17.87■□□□□ 0.45
PTCD3-210ENST00000473829 MRPL46Q9H2W6 279 aaKnown RBP17.87■□□□□ 0.45
PTCD3-210ENST00000473829 ZNF160Q9HCG1 818 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 ATP13A2Q9NQ11 1180 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 TMEM216Q9P0N5 145 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 ANGPTL3Q9Y5C1 460 aa17.87■□□□□ 0.45
PTCD3-210ENST00000473829 LOC102723996A0A087X1L8 192 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 IGHV1-45A0A0A0MS14 117 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 A0A1W2PPM1 405 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 URADA6NGE7 173 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 ERI3O43414 337 aaKnown RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 SUV39H1O43463 412 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 HPP00738 406 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 PLA2G2AP14555 144 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 HSD17B3P37058 310 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 SOX8P57073 446 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 STXBP1P61764 594 aaKnown RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 RHAGQ02094 409 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 MYBPC3Q14896 1274 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 PCOLCEQ15113 449 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 GRHL2Q6ISB3 625 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 PRICKLE2Q7Z3G6 844 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 ZNF605Q86T29 641 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 PARP9Q8IXQ6 854 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 LAS2Q8IYD9 372 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 CYP4X1Q8N118 509 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 RNF175Q8N4F7 328 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 EPS8L3Q8TE67 593 aaKnown RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 ZNF473Q8WTR7 871 aaKnown RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 NSUN5Q96P11 429 aaKnown RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 QRFPRQ96P65 431 aa17.86■□□□□ 0.45
PTCD3-210ENST00000473829 ZNF552Q9H707 407 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 HEMK1Q9Y5R4 338 aaPredicted RBP17.86■□□□□ 0.45
PTCD3-210ENST00000473829 SMIM23A6NLE4 172 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 A8MT66 165 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 STX16-NPEPL1H3BU86 382 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 OR7A17O14581 309 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 STX16O14662 325 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 SLC28A2O43868 658 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 SMIM24O75264 130 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 C8orf89P0DMQ9 161 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 PYGBP11216 843 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 PCNAP12004 261 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 ITGA3P26006 1051 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 BTN3A2P78410 334 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 HIST2H2ACQ16777 129 aaPredicted RBP17.85■□□□□ 0.45
PTCD3-210ENST00000473829 HIST2H2AA3Q6FI13 130 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 NIPAL1Q6NVV3 410 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 MED27Q6P2C8 311 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 RPS27LQ71UM5 84 aaKnown RBP17.85■□□□□ 0.45
PTCD3-210ENST00000473829 CA13Q8N1Q1 262 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 OR7G3Q8NG95 312 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 AENQ8WTP8 325 aaKnown RBP17.85■□□□□ 0.45
PTCD3-210ENST00000473829 TSLPQ969D9 159 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 OR1F2PQ96R84 312 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 F2RL3Q96RI0 385 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 CCDC77Q9BR77 488 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 MS4A8Q9BY19 250 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 REXO4Q9GZR2 422 aaKnown RBP17.85■□□□□ 0.45
PTCD3-210ENST00000473829 IPPKQ9H8X2 491 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 ZBTB26Q9HCK0 441 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 PCTPQ9UKL6 214 aa17.85■□□□□ 0.45
PTCD3-210ENST00000473829 TNPO3Q9Y5L0 923 aaKnown RBP17.85■□□□□ 0.45
PTCD3-210ENST00000473829 FASNP49327 2511 aaKnown RBP17.84■□□□□ 0.45
PTCD3-210ENST00000473829 IGHV3-20A0A0C4DH32 117 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 FHP07954 510 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 CELA2AP08217 269 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 RPS17P08708 135 aaKnown RBP17.84■□□□□ 0.45
PTCD3-210ENST00000473829 CD97P48960 835 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 PLA2G16P53816 162 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 SKP1P63208 163 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 KLRB1Q12918 225 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 RUNX2Q13950 521 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 NADK2Q4G0N4 442 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 VWA5B1Q5TIE3 1220 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 WDR93Q6P2C0 686 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 ABHD17CQ6PCB6 329 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 NDUFAF7Q7L592 441 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 UBE3DQ7Z6J8 389 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 TDRPQ86YL5 185 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 MYLK4Q86YV6 388 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-210ENST00000473829 OR2L5Q8NG80 312 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 OR52B6Q8NGF0 335 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 OR2W6PQ8NHA6 318 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 TBC1D20Q96BZ9 403 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 CDK15Q96Q40 435 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 ZNF700Q9H0M5 742 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 NOL11Q9H8H0 719 aaKnown RBP17.84■□□□□ 0.45
PTCD3-210ENST00000473829 ACTR8Q9H981 624 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 ZBTB20Q9HC78 741 aaPredicted RBP17.84■□□□□ 0.45
PTCD3-210ENST00000473829 TMCO1Q9UM00 188 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 RNF11Q9Y3C5 154 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 ZNF451Q9Y4E5 1061 aa17.84■□□□□ 0.45
PTCD3-210ENST00000473829 NSG1A0A0A6YYJ2 146 aa17.83■□□□□ 0.44
PTCD3-210ENST00000473829 FAM227AF5H4B4 570 aa17.83■□□□□ 0.44
PTCD3-210ENST00000473829 PYCARD-AS1I3L0S3 204 aa17.83■□□□□ 0.44
PTCD3-210ENST00000473829 SH3BGRLO75368 114 aa17.83■□□□□ 0.44
PTCD3-210ENST00000473829 CYC1P08574 325 aa17.83■□□□□ 0.44
PTCD3-210ENST00000473829 CERS1P27544 350 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms