RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 POU2F1P14859 743 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 GABRB1P18505 474 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 PXNP49023 591 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-207ENST00000473212 MC1RQ01726 317 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 SP140Q13342 867 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 TSTA3Q13630 321 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-207ENST00000473212 C10orf62Q5T681 223 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-207ENST00000473212 TMEM25Q86YD3 366 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 OR9Q2Q8NGE9 314 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 OR4A15Q8NGL6 344 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 C11orf24Q96F05 449 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-207ENST00000473212 ROGDIQ9GZN7 287 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 HOXD1Q9GZZ0 328 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 SGK2Q9HBY8 427 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 CHD7Q9P2D1 2997 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 TSPAN6O43657 245 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 SLC16A8O95907 504 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 PDHA2P29803 388 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 PBLDP30039 288 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-207ENST00000473212 C21orf58P58505 322 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 FBXO43Q4G163 708 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 CCBE1Q6UXH8 406 aaPredicted RBP20.27■□□□□ 0.84
COL18A1-207ENST00000473212 GDPD3Q7L5L3 318 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 NLGN4XQ8N0W4 816 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 OR4C15Q8NGM1 316 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 TMEM169Q96HH4 297 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 LMLNQ96KR4 655 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 MS4A12Q9NXJ0 267 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 CORO2BQ9UQ03 480 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 POFUT2Q9Y2G5 429 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 IFT52Q9Y366 437 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 DNAH14Q0VDD8 3507 aa20.27■□□□□ 0.84
COL18A1-207ENST00000473212 SLC16A5O15375 505 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 MED26O95402 600 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 IDSP22304 550 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 UGT2B15P54855 530 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 RAB33AQ14088 237 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 MPPE1Q53F39 396 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 PLEKHS1Q5SXH7 462 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.26■□□□□ 0.83
COL18A1-207ENST00000473212 SPATC1Q76KD6 591 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 CLIP4Q8N3C7 705 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 ATL1Q8WXF7 558 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 MAGEB10Q96LZ2 347 aaPredicted RBP20.26■□□□□ 0.83
COL18A1-207ENST00000473212 RAD9AQ99638 391 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 IMPAD1Q9NX62 359 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 DUSP12Q9UNI6 340 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 PCDHGB6Q9Y5F9 930 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 ANXA8P13928 327 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 PPIBP23284 216 aaKnown RBP20.26■□□□□ 0.83
COL18A1-207ENST00000473212 CASP3P42574 277 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 TP53BP2Q13625 1128 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 TEAD4Q15561 434 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 MICAQ29983 383 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 AGTRAPQ6RW13 159 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 B3GNT7Q8NFL0 401 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 HUS1BQ8NHY5 278 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 RIOK2Q9BVS4 552 aaKnown RBP20.26■□□□□ 0.83
COL18A1-207ENST00000473212 STOX2Q9P2F5 926 aaPredicted RBP20.26■□□□□ 0.83
COL18A1-207ENST00000473212 USP34Q70CQ2 3546 aa20.26■□□□□ 0.83
COL18A1-207ENST00000473212 MGAT4DA6NG13 374 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 LEFTY2O00292 366 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 LIMK1P53667 647 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 HTR3DQ70Z44 454 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 CYP4Z2PQ8N1L4 340 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 CELF2-AS1Q8N7Q2 184 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF366Q8N895 744 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 OR5AK3PQ8NH89 298 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 CIDECQ96AQ7 238 aaPredicted RBP20.25■□□□□ 0.83
COL18A1-207ENST00000473212 TCF25Q9BQ70 676 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 KLHL3Q9UH77 587 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 PEX16Q9Y5Y5 336 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 GNG14A0A1W2PPG7 69 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 KMOO15229 486 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 UGDHO60701 494 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 ADRA2AP08913 450 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 RPS13P62277 151 aaKnown RBP20.25■□□□□ 0.83
COL18A1-207ENST00000473212 MEF2AQ02078 507 aaPredicted RBP20.25■□□□□ 0.83
COL18A1-207ENST00000473212 DOC2BQ14184 412 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 IFI44LQ53G44 452 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 ANXA8L1Q5VT79 327 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 TCEAL8Q8IYN2 117 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 DEPDC4Q8N2C3 294 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 DENND6BQ8NEG7 585 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 CAPSLQ8WWF8 208 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 OR5M11Q96RB7 305 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 TRIM39Q9HCM9 518 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 HMX1Q9NP08 348 aaPredicted RBP20.25■□□□□ 0.83
COL18A1-207ENST00000473212 HS3ST2Q9Y278 367 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 PPIL1Q9Y3C6 166 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 CFAP20Q9Y6A4 193 aaKnown RBP20.25■□□□□ 0.83
COL18A1-207ENST00000473212 COL4A6Q14031 1691 aa20.25■□□□□ 0.83
COL18A1-207ENST00000473212 DYRK3O43781 588 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 KIAA0513O60268 411 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 ASMTP46597 345 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 HBA1P69905 142 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 OR7G3Q8NG95 312 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 GTPBP3Q969Y2 492 aaKnown RBP20.24■□□□□ 0.83
COL18A1-207ENST00000473212 SLC46A2Q9BY10 475 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 SNX8Q9Y5X2 465 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms